Protein–RNA interactions for Protein: O35177

Nedd9, Enhancer of filamentation 1, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd9O35177 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.91□□□□□ -1.78
Nedd9O35177 Gm17162-201ENSMUST00000168538 473 ntBASIC3.91□□□□□ -1.78
Nedd9O35177 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Nedd9O35177 Gm37642-201ENSMUST00000193166 1735 ntBASIC3.91□□□□□ -1.78
Nedd9O35177 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.91□□□□□ -1.78
Nedd9O35177 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.91□□□□□ -1.78
Nedd9O35177 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Nedd9O35177 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.91□□□□□ -1.78
Nedd9O35177 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC3.91□□□□□ -1.78
Nedd9O35177 Gm44475-201ENSMUST00000204041 424 ntBASIC3.91□□□□□ -1.78
Nedd9O35177 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC3.91□□□□□ -1.78
Nedd9O35177 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.91□□□□□ -1.78
Nedd9O35177 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Nedd9O35177 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Nedd9O35177 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.91□□□□□ -1.78
Nedd9O35177 Gm25207-201ENSMUST00000093745 107 ntBASIC3.91□□□□□ -1.78
Nedd9O35177 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.91□□□□□ -1.78
Nedd9O35177 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Nedd9O35177 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Nedd9O35177 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Nedd9O35177 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.9□□□□□ -1.78
Nedd9O35177 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.9□□□□□ -1.78
Nedd9O35177 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.9□□□□□ -1.78
Nedd9O35177 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Nedd9O35177 Snord98-201ENSMUST00000116819 65 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm15844-201ENSMUST00000118016 576 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm11704-201ENSMUST00000120031 214 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm13153-201ENSMUST00000120969 637 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm16358-201ENSMUST00000146046 210 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm22320-201ENSMUST00000157149 312 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm25637-201ENSMUST00000157529 107 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm23779-201ENSMUST00000157938 64 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Mir5624-201ENSMUST00000176635 61 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm22951-201ENSMUST00000179471 107 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm19637-201ENSMUST00000185933 579 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm37128-201ENSMUST00000192599 232 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm6059-201ENSMUST00000196903 340 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm18540-201ENSMUST00000204025 526 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm44055-201ENSMUST00000204376 247 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm44825-201ENSMUST00000207557 150 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm44598-201ENSMUST00000207566 150 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm2829-201ENSMUST00000213121 499 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm30674-201ENSMUST00000214523 392 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Nedd9O35177 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Nedd9O35177 Gm24147-201ENSMUST00000082763 144 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm26164-201ENSMUST00000083793 104 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm10212-201ENSMUST00000087884 324 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Nedd9O35177 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Nedd9O35177 Gm44821-201ENSMUST00000208212 2002 ntBASIC3.9□□□□□ -1.79
Nedd9O35177 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Nedd9O35177 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Nedd9O35177 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Nedd9O35177 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Nedd9O35177 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Nedd9O35177 Gm25764-201ENSMUST00000104092 134 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Gm26273-201ENSMUST00000104180 131 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Nedd9O35177 Gm13672-201ENSMUST00000117554 459 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Gm14269-201ENSMUST00000120455 306 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Gm12276-201ENSMUST00000121709 301 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Defb44-ps-201ENSMUST00000126871 219 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC3.89□□□□□ -1.79
Nedd9O35177 Gm5958-201ENSMUST00000147698 297 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC3.89□□□□□ -1.79
Nedd9O35177 Gm24059-201ENSMUST00000157493 312 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Gm23542-201ENSMUST00000158208 96 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Nedd9O35177 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Gm24819-201ENSMUST00000175094 166 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.89□□□□□ -1.79
Nedd9O35177 Gm29330-201ENSMUST00000190032 699 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Gm29334-201ENSMUST00000190334 357 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Gm37001-201ENSMUST00000193377 190 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Gm37617-201ENSMUST00000194309 159 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.89□□□□□ -1.79
Nedd9O35177 Gm44324-201ENSMUST00000198517 135 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.89□□□□□ -1.79
Nedd9O35177 Gm43415-201ENSMUST00000201934 750 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Gm45119-201ENSMUST00000207612 199 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.89□□□□□ -1.79
Nedd9O35177 AC170600.1-201ENSMUST00000228763 277 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Gm22061-201ENSMUST00000082557 107 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Gm23412-201ENSMUST00000083017 107 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Gm23650-201ENSMUST00000083355 70 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Nedd9O35177 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
Nedd9O35177 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Nedd9O35177 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.89□□□□□ -1.79
Nedd9O35177 CT030170.3-201ENSMUST00000221205 1815 ntBASIC3.88□□□□□ -1.79
Nedd9O35177 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Nedd9O35177 Gm14537-201ENSMUST00000117464 599 ntBASIC3.88□□□□□ -1.79
Nedd9O35177 Gm14013-201ENSMUST00000119006 270 ntBASIC3.88□□□□□ -1.79
Nedd9O35177 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms