Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 CT030170.3-201ENSMUST00000221205 1815 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm24281-201ENSMUST00000104234 136 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Mir294-201ENSMUST00000104710 84 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm22488-201ENSMUST00000116811 127 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm16005-201ENSMUST00000120515 269 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm22204-201ENSMUST00000122654 327 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm16358-201ENSMUST00000146046 210 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm24409-201ENSMUST00000157881 152 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm20534-201ENSMUST00000172957 172 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Mir5129-201ENSMUST00000174938 78 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm23047-201ENSMUST00000177661 94 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm22367-201ENSMUST00000178930 132 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm23816-201ENSMUST00000179617 132 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Mir6907-201ENSMUST00000183764 71 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm2077-201ENSMUST00000195017 319 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm42832-201ENSMUST00000196361 745 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Mir129b-201ENSMUST00000197461 65 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm35876-201ENSMUST00000205044 459 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm45523-201ENSMUST00000210712 799 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.15□□□□□ -1.91
Shisa8J3QNX5 AC167229.1-201ENSMUST00000220057 469 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 AC074315.1-201ENSMUST00000228801 214 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Gm25205-201ENSMUST00000082841 103 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Shisa8J3QNX5 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm12125-201ENSMUST00000117261 736 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm11363-201ENSMUST00000121672 548 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm15167-201ENSMUST00000121997 187 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm5958-201ENSMUST00000147698 297 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm23671-201ENSMUST00000157472 103 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Mir5098-201ENSMUST00000175320 82 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm23415-201ENSMUST00000175519 83 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm24618-201ENSMUST00000177718 94 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm23953-201ENSMUST00000178214 94 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm26332-201ENSMUST00000179813 94 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm22863-201ENSMUST00000180265 94 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm18486-201ENSMUST00000184040 298 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm27648-201ENSMUST00000184315 107 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm19637-201ENSMUST00000185933 579 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.14□□□□□ -1.91
Shisa8J3QNX5 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm9379-201ENSMUST00000196790 646 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm43405-201ENSMUST00000198642 337 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Mir691-201ENSMUST00000199719 78 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm43393-201ENSMUST00000200147 194 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm20039-201ENSMUST00000210329 394 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 AC160031.2-201ENSMUST00000218242 274 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm26055-201ENSMUST00000083038 107 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.14□□□□□ -1.91
Shisa8J3QNX5 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Gm23941-201ENSMUST00000101953 107 ntBASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Gm5762-201ENSMUST00000119204 258 ntBASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Gm13873-201ENSMUST00000119208 427 ntBASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Gm25808-201ENSMUST00000122784 284 ntBASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Gm15733-201ENSMUST00000132957 242 ntBASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Gm25386-201ENSMUST00000157814 288 ntBASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Gm27999-201ENSMUST00000183539 193 ntBASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Gm27189-201ENSMUST00000184119 190 ntBASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Gm28030-201ENSMUST00000184987 138 ntBASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Gm8296-201ENSMUST00000185597 524 ntBASIC3.13□□□□□ -1.91
Shisa8J3QNX5 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Gm7449-201ENSMUST00000194393 663 ntBASIC3.13□□□□□ -1.91
Shisa8J3QNX5 Gm19202-201ENSMUST00000198096 808 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 139 ms