Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Gm14558-201ENSMUST00000117458 381 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm13806-201ENSMUST00000117822 325 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm11845-201ENSMUST00000117886 327 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm14841-201ENSMUST00000121067 758 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm14389-201ENSMUST00000140453 241 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm23588-201ENSMUST00000157659 99 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm23865-201ENSMUST00000157723 97 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm24438-201ENSMUST00000157893 115 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm24213-201ENSMUST00000158255 258 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm26061-201ENSMUST00000175584 108 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm20651-201ENSMUST00000177219 329 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm27783-201ENSMUST00000183534 105 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm27919-201ENSMUST00000185163 107 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm29104-201ENSMUST00000186304 222 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm28779-201ENSMUST00000189678 323 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm28404-201ENSMUST00000190242 453 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm43284-201ENSMUST00000200103 253 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm44011-201ENSMUST00000203336 394 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm44399-201ENSMUST00000205043 226 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm44600-201ENSMUST00000208540 111 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm26228-201ENSMUST00000082512 107 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm25080-201ENSMUST00000082526 107 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm25518-201ENSMUST00000083864 107 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Gm25257-201ENSMUST00000083907 110 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.3□□□□□ -2.04
Trbv17A0A140T8P8 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm22023-201ENSMUST00000104354 130 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm8260-201ENSMUST00000119230 353 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm12155-201ENSMUST00000121267 160 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm22961-201ENSMUST00000157964 106 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm24393-201ENSMUST00000158135 97 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm26005-201ENSMUST00000158802 134 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm9071-201ENSMUST00000165915 474 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm25748-201ENSMUST00000175487 70 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm20672-201ENSMUST00000176605 261 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm20794-201ENSMUST00000177626 628 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm21744-201ENSMUST00000178403 662 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm21171-201ENSMUST00000180048 673 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm29413-201ENSMUST00000186019 880 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm28700-201ENSMUST00000187614 579 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm29452-201ENSMUST00000187996 313 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm28860-201ENSMUST00000188103 313 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm29639-201ENSMUST00000188375 580 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm28843-201ENSMUST00000189198 678 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm6801-201ENSMUST00000190697 339 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm29546-201ENSMUST00000191171 678 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm37771-201ENSMUST00000193121 265 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm43402-201ENSMUST00000197159 159 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm43932-201ENSMUST00000204499 52 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm7948-201ENSMUST00000212607 844 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm4945-201ENSMUST00000075152 453 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm26108-201ENSMUST00000083973 191 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.29□□□□□ -2.04
Trbv17A0A140T8P8 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.28□□□□□ -2.04
Trbv17A0A140T8P8 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trbv17A0A140T8P8 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.28□□□□□ -2.04
Trbv17A0A140T8P8 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.28□□□□□ -2.04
Trbv17A0A140T8P8 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.28□□□□□ -2.04
Trbv17A0A140T8P8 Gm24403-201ENSMUST00000104616 130 ntBASIC2.28□□□□□ -2.04
Trbv17A0A140T8P8 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trbv17A0A140T8P8 Gm12053-201ENSMUST00000119022 252 ntBASIC2.28□□□□□ -2.04
Trbv17A0A140T8P8 Gm15106-201ENSMUST00000119691 821 ntBASIC2.28□□□□□ -2.04
Trbv17A0A140T8P8 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.28□□□□□ -2.04
Trbv17A0A140T8P8 Gm15190-201ENSMUST00000120855 276 ntBASIC2.28□□□□□ -2.04
Trbv17A0A140T8P8 Gm12770-201ENSMUST00000121734 462 ntBASIC2.28□□□□□ -2.04
Trbv17A0A140T8P8 Gm14629-201ENSMUST00000122428 144 ntBASIC2.28□□□□□ -2.04
Trbv17A0A140T8P8 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
Trbv17A0A140T8P8 Gm24914-201ENSMUST00000157285 313 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms