Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 Gm42454-201ENSMUST00000196805 1181 ntBASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 Igkv1-108-201ENSMUST00000198926 298 ntBASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 Igkv11-118-201ENSMUST00000199448 346 ntBASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 Gm45207-201ENSMUST00000207469 145 ntBASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 AC126672.1-201ENSMUST00000217096 396 ntBASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 AC111046.1-201ENSMUST00000217715 412 ntBASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 Gm25683-201ENSMUST00000083940 131 ntBASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 AC153964.2-201ENSMUST00000217704 2474 ntBASIC0.76□□□□□ -2.29
Trav4d-3A0A075B625 Mir223-201ENSMUST00000102112 110 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Gm23109-201ENSMUST00000116867 126 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Gm15421-202ENSMUST00000118224 399 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Gm6461-201ENSMUST00000120015 633 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Gm11965-201ENSMUST00000122017 277 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Gm14840-201ENSMUST00000122135 594 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Gm8121-201ENSMUST00000153583 499 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Gm23122-201ENSMUST00000157645 103 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Gm24858-201ENSMUST00000158058 323 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Gm24925-201ENSMUST00000178157 107 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Mir6374-201ENSMUST00000184003 107 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Gm27493-201ENSMUST00000184128 78 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Mir6380-201ENSMUST00000184334 81 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Gm29740-201ENSMUST00000193182 655 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Gm44919-201ENSMUST00000208587 1073 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 CT009696.2-201ENSMUST00000216668 432 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 AC142113.2-201ENSMUST00000217425 748 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Gm2446-201ENSMUST00000220144 772 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 AC134601.3-201ENSMUST00000221682 154 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 AC160930.1-201ENSMUST00000227194 337 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Mir211-201ENSMUST00000083651 106 ntBASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Trav4d-3A0A075B625 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Gm12393-201ENSMUST00000117084 848 ntBASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Gm13046-201ENSMUST00000117391 501 ntBASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Gm12636-201ENSMUST00000117395 624 ntBASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Gm26089-201ENSMUST00000157898 107 ntBASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Gm27520-201ENSMUST00000184872 81 ntBASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Gm29657-201ENSMUST00000189807 342 ntBASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Gm44182-201ENSMUST00000204052 115 ntBASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Gm19140-201ENSMUST00000209790 421 ntBASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Gm21937-201ENSMUST00000222825 218 ntBASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 AC155314.1-201ENSMUST00000227624 508 ntBASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Hmgb1l-201ENSMUST00000082150 571 ntBASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Gm25853-201ENSMUST00000082793 132 ntBASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Gm15084-201ENSMUST00000178585 1502 ntBASIC0.74□□□□□ -2.29
Trav4d-3A0A075B625 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC0.73□□□□□ -2.29
Trav4d-3A0A075B625 AL645643.1-201ENSMUST00000222438 3897 ntBASIC0.73□□□□□ -2.29
Trav4d-3A0A075B625 Gm12897-201ENSMUST00000120341 250 ntBASIC0.73□□□□□ -2.29
Trav4d-3A0A075B625 Gm26049-201ENSMUST00000157313 108 ntBASIC0.73□□□□□ -2.29
Trav4d-3A0A075B625 Mir669n-201ENSMUST00000158636 54 ntBASIC0.73□□□□□ -2.29
Trav4d-3A0A075B625 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC0.73□□□□□ -2.29
Trav4d-3A0A075B625 Gm17061-201ENSMUST00000163167 499 ntBASIC0.73□□□□□ -2.29
Trav4d-3A0A075B625 Gm17062-201ENSMUST00000166987 461 ntBASIC0.73□□□□□ -2.29
Trav4d-3A0A075B625 Gm29231-201ENSMUST00000179850 319 ntBASIC0.73□□□□□ -2.29
Trav4d-3A0A075B625 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC0.73□□□□□ -2.29
Trav4d-3A0A075B625 Gm28437-201ENSMUST00000190277 783 ntBASIC0.73□□□□□ -2.29
Trav4d-3A0A075B625 Gm29192-201ENSMUST00000190942 377 ntBASIC0.73□□□□□ -2.29
Trav4d-3A0A075B625 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
Trav4d-3A0A075B625 AC154296.1-201ENSMUST00000198150 67 ntBASIC0.73□□□□□ -2.29
Trav4d-3A0A075B625 Mir1291-201ENSMUST00000199842 117 ntBASIC0.73□□□□□ -2.29
Trav4d-3A0A075B625 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC0.73□□□□□ -2.29
Trav4d-3A0A075B625 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC0.73□□□□□ -2.29
Trav4d-3A0A075B625 Snord14a-201ENSMUST00000082807 87 ntBASIC0.73□□□□□ -2.29
Trav4d-3A0A075B625 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Trav4d-3A0A075B625 Igkv13-87-201ENSMUST00000114214 286 ntBASIC0.72□□□□□ -2.29
Trav4d-3A0A075B625 Gm13678-201ENSMUST00000118926 340 ntBASIC0.72□□□□□ -2.29
Trav4d-3A0A075B625 Gm12639-201ENSMUST00000121400 493 ntBASIC0.72□□□□□ -2.29
Trav4d-3A0A075B625 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC0.72□□□□□ -2.29
Trav4d-3A0A075B625 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC0.72□□□□□ -2.29
Trav4d-3A0A075B625 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Trav4d-3A0A075B625 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 158.5 ms