Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 CT485608.1-201ENSMUST00000228759 389 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Gm23615-201ENSMUST00000082602 65 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm14518-201ENSMUST00000117351 542 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm13728-201ENSMUST00000117471 400 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm12954-201ENSMUST00000118610 611 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm6079-201ENSMUST00000121356 404 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm11384-201ENSMUST00000121376 303 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm13368-201ENSMUST00000122443 430 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm12238-201ENSMUST00000127764 124 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm24291-201ENSMUST00000157633 162 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm26041-201ENSMUST00000158148 108 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm25902-201ENSMUST00000158493 318 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Cfap61-214ENSMUST00000167179 183 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm22108-201ENSMUST00000177961 106 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm24798-201ENSMUST00000179334 106 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm27580-201ENSMUST00000183666 149 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm8151-201ENSMUST00000184817 871 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm28390-201ENSMUST00000185212 700 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm29192-201ENSMUST00000190942 377 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm37658-201ENSMUST00000192672 315 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm37807-201ENSMUST00000194310 190 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm37119-201ENSMUST00000195691 389 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm44142-201ENSMUST00000203358 311 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm44060-201ENSMUST00000204440 410 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm5322-201ENSMUST00000206142 699 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm45101-201ENSMUST00000208327 232 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm45273-201ENSMUST00000211559 281 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm22061-201ENSMUST00000082557 107 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.48□□□□□ -2.01
Trav1A0A075B5Z4 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm23256-201ENSMUST00000102235 110 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm26140-201ENSMUST00000103807 110 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm26341-201ENSMUST00000104561 134 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm13614-201ENSMUST00000117306 503 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm15175-201ENSMUST00000117629 132 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm12806-201ENSMUST00000119384 268 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm15760-201ENSMUST00000119553 283 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm11849-201ENSMUST00000121293 261 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm14562-201ENSMUST00000129885 543 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm22755-201ENSMUST00000157143 100 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm22792-201ENSMUST00000157225 133 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm17187-201ENSMUST00000164622 410 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm21754-201ENSMUST00000177550 479 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm22908-201ENSMUST00000177620 110 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Mir6363-201ENSMUST00000184880 114 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm44324-201ENSMUST00000198517 135 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm42818-201ENSMUST00000198869 987 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm6615-201ENSMUST00000199426 631 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm44754-201ENSMUST00000208155 400 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 AC162387.1-201ENSMUST00000213369 213 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm30534-201ENSMUST00000217928 207 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm22974-201ENSMUST00000083301 103 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gm23850-201ENSMUST00000083830 169 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Trav1A0A075B5Z4 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.01
Trav1A0A075B5Z4 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.01
Trav1A0A075B5Z4 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
Trav1A0A075B5Z4 Gm23234-201ENSMUST00000157304 134 ntBASIC2.46□□□□□ -2.02
Trav1A0A075B5Z4 Gm26411-201ENSMUST00000157668 107 ntBASIC2.46□□□□□ -2.02
Trav1A0A075B5Z4 Gm23068-201ENSMUST00000158239 293 ntBASIC2.46□□□□□ -2.02
Trav1A0A075B5Z4 Gm8338-201ENSMUST00000163928 363 ntBASIC2.46□□□□□ -2.02
Trav1A0A075B5Z4 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.46□□□□□ -2.02
Trav1A0A075B5Z4 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Trav1A0A075B5Z4 Gm9071-201ENSMUST00000165915 474 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms