Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm22061-201ENSMUST00000082557 107 ntBASIC2.74□□□□□ -1.97
H2afb1S4R1E0 Gm24147-201ENSMUST00000082763 144 ntBASIC2.74□□□□□ -1.97
H2afb1S4R1E0 Gm22507-201ENSMUST00000082773 160 ntBASIC2.74□□□□□ -1.97
H2afb1S4R1E0 Gm26055-201ENSMUST00000083038 107 ntBASIC2.74□□□□□ -1.97
H2afb1S4R1E0 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.74□□□□□ -1.97
H2afb1S4R1E0 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
H2afb1S4R1E0 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
H2afb1S4R1E0 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
H2afb1S4R1E0 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
H2afb1S4R1E0 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
H2afb1S4R1E0 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
H2afb1S4R1E0 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
H2afb1S4R1E0 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.74□□□□□ -1.97
H2afb1S4R1E0 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm23609-201ENSMUST00000104542 127 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm26473-201ENSMUST00000116763 127 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm9043-201ENSMUST00000119677 314 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm12723-201ENSMUST00000120700 451 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm14049-201ENSMUST00000121009 636 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Mup-ps20-201ENSMUST00000121132 389 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm25945-201ENSMUST00000122484 135 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm25283-201ENSMUST00000157272 77 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm26406-201ENSMUST00000158503 124 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm26159-201ENSMUST00000158968 104 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm26968-201ENSMUST00000182894 481 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm27660-201ENSMUST00000184028 208 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm27893-201ENSMUST00000184408 194 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm21673-201ENSMUST00000186640 436 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm21135-201ENSMUST00000189023 436 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm32340-201ENSMUST00000192883 259 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm37119-201ENSMUST00000195691 389 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm5034-201ENSMUST00000199115 634 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.73□□□□□ -1.97
H2afb1S4R1E0 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm5265-201ENSMUST00000076828 342 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Gm23093-201ENSMUST00000083450 102 ntBASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2.73□□□□□ -1.97
H2afb1S4R1E0 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
H2afb1S4R1E0 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Gm7853-201ENSMUST00000100708 478 ntBASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Gm14825-201ENSMUST00000113538 701 ntBASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Gm13803-201ENSMUST00000117547 489 ntBASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Gm15988-201ENSMUST00000118677 367 ntBASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Gm14392-201ENSMUST00000120332 401 ntBASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Gm14413-201ENSMUST00000122158 408 ntBASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Gm22452-201ENSMUST00000122804 104 ntBASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Gm26041-201ENSMUST00000158148 108 ntBASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Gm23028-201ENSMUST00000158773 265 ntBASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Gm9071-201ENSMUST00000165915 474 ntBASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Gm17162-201ENSMUST00000168538 473 ntBASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Gm26061-201ENSMUST00000175584 108 ntBASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Gm29330-201ENSMUST00000190032 699 ntBASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
H2afb1S4R1E0 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.72□□□□□ -1.97
H2afb1S4R1E0 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.72□□□□□ -1.97
H2afb1S4R1E0 AC120553.1-201ENSMUST00000227313 260 ntBASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Gm23741-201ENSMUST00000097237 171 ntBASIC2.72□□□□□ -1.97
H2afb1S4R1E0 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
H2afb1S4R1E0 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Mir542-201ENSMUST00000102186 85 ntBASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Gm12902-201ENSMUST00000118389 322 ntBASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Gm11512-201ENSMUST00000119669 663 ntBASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Gm22956-201ENSMUST00000122520 80 ntBASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Gm26020-201ENSMUST00000122729 183 ntBASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Mir6363-201ENSMUST00000184880 114 ntBASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Gm28399-201ENSMUST00000186221 318 ntBASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Gm29104-201ENSMUST00000186304 222 ntBASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Gm28572-201ENSMUST00000187444 318 ntBASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Gm43393-201ENSMUST00000200147 194 ntBASIC2.71□□□□□ -1.98
H2afb1S4R1E0 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms