Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm7346-201ENSMUST00000169661 476 ntBASIC1.61□□□□□ -2.15
Scn8aQ9WTU3 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC1.61□□□□□ -2.15
Scn8aQ9WTU3 Gm37708-201ENSMUST00000192337 895 ntBASIC1.61□□□□□ -2.15
Scn8aQ9WTU3 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC1.61□□□□□ -2.15
Scn8aQ9WTU3 Gm43096-201ENSMUST00000196173 421 ntBASIC1.61□□□□□ -2.15
Scn8aQ9WTU3 Gm44865-201ENSMUST00000207240 531 ntBASIC1.61□□□□□ -2.15
Scn8aQ9WTU3 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC1.61□□□□□ -2.15
Scn8aQ9WTU3 AC154636.3-201ENSMUST00000221489 1214 ntBASIC1.61□□□□□ -2.15
Scn8aQ9WTU3 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
Scn8aQ9WTU3 Gm11268-201ENSMUST00000118347 267 ntBASIC1.6□□□□□ -2.15
Scn8aQ9WTU3 Gm11935-201ENSMUST00000118608 399 ntBASIC1.6□□□□□ -2.15
Scn8aQ9WTU3 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.6□□□□□ -2.15
Scn8aQ9WTU3 Gm5646-201ENSMUST00000120568 714 ntBASIC1.6□□□□□ -2.15
Scn8aQ9WTU3 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Scn8aQ9WTU3 Gm28650-201ENSMUST00000188413 411 ntBASIC1.6□□□□□ -2.15
Scn8aQ9WTU3 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC1.6□□□□□ -2.15
Scn8aQ9WTU3 Gm45048-201ENSMUST00000207058 429 ntBASIC1.6□□□□□ -2.15
Scn8aQ9WTU3 Gm44849-201ENSMUST00000207595 484 ntBASIC1.6□□□□□ -2.15
Scn8aQ9WTU3 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC1.6□□□□□ -2.15
Scn8aQ9WTU3 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Scn8aQ9WTU3 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
Scn8aQ9WTU3 Gm45577-201ENSMUST00000210206 2287 ntBASIC1.6□□□□□ -2.15
Scn8aQ9WTU3 Gm1989-201ENSMUST00000126244 636 ntBASIC1.59□□□□□ -2.15
Scn8aQ9WTU3 Gm26101-201ENSMUST00000157246 105 ntBASIC1.59□□□□□ -2.15
Scn8aQ9WTU3 Gm25831-201ENSMUST00000158924 163 ntBASIC1.59□□□□□ -2.15
Scn8aQ9WTU3 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Scn8aQ9WTU3 Mir6351-201ENSMUST00000183826 99 ntBASIC1.59□□□□□ -2.15
Scn8aQ9WTU3 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC1.59□□□□□ -2.15
Scn8aQ9WTU3 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC1.59□□□□□ -2.15
Scn8aQ9WTU3 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.59□□□□□ -2.15
Scn8aQ9WTU3 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC1.59□□□□□ -2.15
Scn8aQ9WTU3 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Scn8aQ9WTU3 Gm20679-201ENSMUST00000177285 1402 ntBASIC1.59□□□□□ -2.15
Scn8aQ9WTU3 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.59□□□□□ -2.15
Scn8aQ9WTU3 Gm27013-202ENSMUST00000205067 1436 ntBASIC1.59□□□□□ -2.16
Scn8aQ9WTU3 Gm14882-201ENSMUST00000117216 218 ntBASIC1.59□□□□□ -2.16
Scn8aQ9WTU3 Gm15183-201ENSMUST00000118933 348 ntBASIC1.59□□□□□ -2.16
Scn8aQ9WTU3 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.59□□□□□ -2.16
Scn8aQ9WTU3 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.59□□□□□ -2.16
Scn8aQ9WTU3 Gm23267-201ENSMUST00000178490 132 ntBASIC1.59□□□□□ -2.16
Scn8aQ9WTU3 Mup-ps9-201ENSMUST00000178847 545 ntBASIC1.59□□□□□ -2.16
Scn8aQ9WTU3 Gm23190-201ENSMUST00000180307 64 ntBASIC1.59□□□□□ -2.16
Scn8aQ9WTU3 Gm9541-201ENSMUST00000188409 502 ntBASIC1.59□□□□□ -2.16
Scn8aQ9WTU3 Gm43541-201ENSMUST00000197208 581 ntBASIC1.59□□□□□ -2.16
Scn8aQ9WTU3 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Scn8aQ9WTU3 Gm44061-201ENSMUST00000203962 1195 ntBASIC1.59□□□□□ -2.16
Scn8aQ9WTU3 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
Scn8aQ9WTU3 Gm7648-201ENSMUST00000173036 1658 ntBASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 Gm24889-201ENSMUST00000104388 132 ntBASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 Gm6395-201ENSMUST00000167639 691 ntBASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 Gm22131-201ENSMUST00000178415 94 ntBASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 Gm7329-201ENSMUST00000185915 210 ntBASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 Gm19066-201ENSMUST00000193232 1078 ntBASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 AC165284.1-201ENSMUST00000228614 458 ntBASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 Gm5583-201ENSMUST00000174328 1519 ntBASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 Mir599-201ENSMUST00000102378 88 ntBASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 Gm11252-201ENSMUST00000120572 939 ntBASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 Gm18956-201ENSMUST00000192857 480 ntBASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 Gm18340-201ENSMUST00000196342 609 ntBASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 Gm44295-201ENSMUST00000203805 437 ntBASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 Gm5670-201ENSMUST00000093546 372 ntBASIC1.58□□□□□ -2.16
Scn8aQ9WTU3 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.57□□□□□ -2.16
Scn8aQ9WTU3 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Scn8aQ9WTU3 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Scn8aQ9WTU3 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Scn8aQ9WTU3 Gm14651-201ENSMUST00000147192 442 ntBASIC1.57□□□□□ -2.16
Scn8aQ9WTU3 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Scn8aQ9WTU3 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC1.57□□□□□ -2.16
Scn8aQ9WTU3 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.57□□□□□ -2.16
Scn8aQ9WTU3 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC1.57□□□□□ -2.16
Scn8aQ9WTU3 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Scn8aQ9WTU3 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.57□□□□□ -2.16
Scn8aQ9WTU3 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Gm15161-201ENSMUST00000117340 387 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Gm16100-201ENSMUST00000120489 231 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Mup-ps12-201ENSMUST00000126217 549 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Gm8161-201ENSMUST00000168739 481 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Gm2878-201ENSMUST00000170173 486 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Gm5709-201ENSMUST00000177879 1165 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Mir6402-201ENSMUST00000183406 80 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Gm7858-201ENSMUST00000190177 622 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Gm20811-201ENSMUST00000190500 553 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Gm38238-201ENSMUST00000194334 346 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Gm44404-201ENSMUST00000203979 636 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Gm44665-201ENSMUST00000205381 251 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Mir103-2-201ENSMUST00000083629 86 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Gm12368-201ENSMUST00000122251 434 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Gm14363-201ENSMUST00000122304 409 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Gm25279-201ENSMUST00000122608 133 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Gm23221-201ENSMUST00000158118 93 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Gm24875-201ENSMUST00000158888 104 ntBASIC1.56□□□□□ -2.16
Scn8aQ9WTU3 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.56□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms