Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.55□□□□□ -2.16
Scn11aQ9R053 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Scn11aQ9R053 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.54□□□□□ -2.16
Scn11aQ9R053 Mir5099-201ENSMUST00000175257 74 ntBASIC1.54□□□□□ -2.16
Scn11aQ9R053 Mir6381-201ENSMUST00000183426 87 ntBASIC1.54□□□□□ -2.16
Scn11aQ9R053 Mir6540-201ENSMUST00000184886 108 ntBASIC1.54□□□□□ -2.16
Scn11aQ9R053 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.54□□□□□ -2.16
Scn11aQ9R053 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.54□□□□□ -2.16
Scn11aQ9R053 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC1.54□□□□□ -2.16
Scn11aQ9R053 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.54□□□□□ -2.16
Scn11aQ9R053 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.54□□□□□ -2.16
Scn11aQ9R053 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Scn11aQ9R053 Gm13239-201ENSMUST00000119920 637 ntBASIC1.54□□□□□ -2.16
Scn11aQ9R053 Gm22478-201ENSMUST00000122570 154 ntBASIC1.54□□□□□ -2.16
Scn11aQ9R053 Gm24813-201ENSMUST00000175310 84 ntBASIC1.54□□□□□ -2.16
Scn11aQ9R053 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC1.53□□□□□ -2.16
Scn11aQ9R053 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Scn11aQ9R053 Gm13876-201ENSMUST00000118451 261 ntBASIC1.53□□□□□ -2.16
Scn11aQ9R053 Gm37337-201ENSMUST00000192601 993 ntBASIC1.53□□□□□ -2.16
Scn11aQ9R053 Gm37801-201ENSMUST00000194754 274 ntBASIC1.53□□□□□ -2.16
Scn11aQ9R053 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Scn11aQ9R053 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.53□□□□□ -2.17
Scn11aQ9R053 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.52□□□□□ -2.17
Scn11aQ9R053 Gm11404-201ENSMUST00000120872 494 ntBASIC1.52□□□□□ -2.17
Scn11aQ9R053 Gm22603-201ENSMUST00000157603 96 ntBASIC1.52□□□□□ -2.17
Scn11aQ9R053 Gm23893-201ENSMUST00000158106 134 ntBASIC1.52□□□□□ -2.17
Scn11aQ9R053 Gm24348-201ENSMUST00000158710 130 ntBASIC1.52□□□□□ -2.17
Scn11aQ9R053 Gm25166-201ENSMUST00000158909 111 ntBASIC1.52□□□□□ -2.17
Scn11aQ9R053 Mir5136-201ENSMUST00000175573 76 ntBASIC1.52□□□□□ -2.17
Scn11aQ9R053 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.52□□□□□ -2.17
Scn11aQ9R053 Mir7079-201ENSMUST00000184697 69 ntBASIC1.52□□□□□ -2.17
Scn11aQ9R053 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Scn11aQ9R053 Gm14238-201ENSMUST00000120227 323 ntBASIC1.52□□□□□ -2.17
Scn11aQ9R053 Gm25247-201ENSMUST00000175475 90 ntBASIC1.52□□□□□ -2.17
Scn11aQ9R053 Gm3442-201ENSMUST00000216808 710 ntBASIC1.52□□□□□ -2.17
Scn11aQ9R053 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC1.52□□□□□ -2.17
Scn11aQ9R053 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC1.52□□□□□ -2.17
Scn11aQ9R053 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Scn11aQ9R053 AC164297.6-201ENSMUST00000224643 1568 ntBASIC1.51□□□□□ -2.17
Scn11aQ9R053 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Scn11aQ9R053 Gm13640-201ENSMUST00000118445 264 ntBASIC1.51□□□□□ -2.17
Scn11aQ9R053 Gm11843-201ENSMUST00000118984 425 ntBASIC1.51□□□□□ -2.17
Scn11aQ9R053 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Scn11aQ9R053 Gm17162-201ENSMUST00000168538 473 ntBASIC1.51□□□□□ -2.17
Scn11aQ9R053 Gm25312-201ENSMUST00000178972 107 ntBASIC1.51□□□□□ -2.17
Scn11aQ9R053 Mir6371-201ENSMUST00000184470 111 ntBASIC1.51□□□□□ -2.17
Scn11aQ9R053 Gm27636-201ENSMUST00000184528 122 ntBASIC1.51□□□□□ -2.17
Scn11aQ9R053 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.51□□□□□ -2.17
Scn11aQ9R053 Gm43675-201ENSMUST00000199468 1184 ntBASIC1.51□□□□□ -2.17
Scn11aQ9R053 Crs-ps-201ENSMUST00000203723 760 ntBASIC1.51□□□□□ -2.17
Scn11aQ9R053 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Scn11aQ9R053 Gm24165-201ENSMUST00000082718 128 ntBASIC1.51□□□□□ -2.17
Scn11aQ9R053 Gm25199-201ENSMUST00000083095 104 ntBASIC1.51□□□□□ -2.17
Scn11aQ9R053 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Scn11aQ9R053 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC1.5□□□□□ -2.17
Scn11aQ9R053 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Scn11aQ9R053 Gm29809-201ENSMUST00000218423 493 ntBASIC1.5□□□□□ -2.17
Scn11aQ9R053 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Scn11aQ9R053 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Scn11aQ9R053 Gm42671-201ENSMUST00000198013 1604 ntBASIC1.5□□□□□ -2.17
Scn11aQ9R053 Gm12309-201ENSMUST00000119889 182 ntBASIC1.49□□□□□ -2.17
Scn11aQ9R053 Gm24895-201ENSMUST00000122742 74 ntBASIC1.49□□□□□ -2.17
Scn11aQ9R053 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.49□□□□□ -2.17
Scn11aQ9R053 Gm19649-201ENSMUST00000201126 822 ntBASIC1.49□□□□□ -2.17
Scn11aQ9R053 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.49□□□□□ -2.17
Scn11aQ9R053 Gm16261-201ENSMUST00000096813 205 ntBASIC1.49□□□□□ -2.17
Scn11aQ9R053 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.49□□□□□ -2.17
Scn11aQ9R053 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Scn11aQ9R053 Gm2830-201ENSMUST00000140330 385 ntBASIC1.49□□□□□ -2.17
Scn11aQ9R053 Gm25901-201ENSMUST00000158494 130 ntBASIC1.49□□□□□ -2.17
Scn11aQ9R053 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Scn11aQ9R053 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.49□□□□□ -2.17
Scn11aQ9R053 Snora24-201ENSMUST00000174989 130 ntBASIC1.49□□□□□ -2.17
Scn11aQ9R053 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC1.49□□□□□ -2.17
Scn11aQ9R053 Gm43680-201ENSMUST00000199466 340 ntBASIC1.49□□□□□ -2.17
Scn11aQ9R053 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC1.49□□□□□ -2.17
Scn11aQ9R053 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.49□□□□□ -2.17
Scn11aQ9R053 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Scn11aQ9R053 Gm15443-201ENSMUST00000118947 820 ntBASIC1.48□□□□□ -2.17
Scn11aQ9R053 Gm12587-201ENSMUST00000120180 427 ntBASIC1.48□□□□□ -2.17
Scn11aQ9R053 Gm24632-201ENSMUST00000122770 323 ntBASIC1.48□□□□□ -2.17
Scn11aQ9R053 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC1.48□□□□□ -2.17
Scn11aQ9R053 Gm18964-201ENSMUST00000193013 563 ntBASIC1.48□□□□□ -2.17
Scn11aQ9R053 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC1.48□□□□□ -2.17
Scn11aQ9R053 Gm43865-201ENSMUST00000204721 127 ntBASIC1.48□□□□□ -2.17
Scn11aQ9R053 AC158395.1-201ENSMUST00000227206 452 ntBASIC1.48□□□□□ -2.17
Scn11aQ9R053 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Scn11aQ9R053 Gm25497-201ENSMUST00000104425 132 ntBASIC1.47□□□□□ -2.17
Scn11aQ9R053 Gm23120-201ENSMUST00000157654 287 ntBASIC1.47□□□□□ -2.17
Scn11aQ9R053 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC1.47□□□□□ -2.17
Scn11aQ9R053 Gm19641-201ENSMUST00000188432 417 ntBASIC1.47□□□□□ -2.17
Scn11aQ9R053 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.47□□□□□ -2.17
Scn11aQ9R053 Gm37523-201ENSMUST00000194901 412 ntBASIC1.47□□□□□ -2.17
Scn11aQ9R053 Gm33866-201ENSMUST00000196911 289 ntBASIC1.47□□□□□ -2.17
Scn11aQ9R053 Gm45754-201ENSMUST00000212380 279 ntBASIC1.47□□□□□ -2.17
Scn11aQ9R053 Gm8125-201ENSMUST00000216602 738 ntBASIC1.47□□□□□ -2.17
Scn11aQ9R053 Gm9068-201ENSMUST00000217393 455 ntBASIC1.47□□□□□ -2.17
Scn11aQ9R053 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Scn11aQ9R053 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Scn11aQ9R053 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 131.5 ms