Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Shroom3Q9QXN0 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shroom3Q9QXN0 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shroom3Q9QXN0 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Shroom3Q9QXN0 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Shroom3Q9QXN0 Gm13167-201ENSMUST00000118554 578 ntBASIC3.3□□□□□ -1.88
Shroom3Q9QXN0 Gm12739-201ENSMUST00000119769 382 ntBASIC3.3□□□□□ -1.88
Shroom3Q9QXN0 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.3□□□□□ -1.88
Shroom3Q9QXN0 Gm25643-201ENSMUST00000158874 103 ntBASIC3.3□□□□□ -1.88
Shroom3Q9QXN0 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Shroom3Q9QXN0 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shroom3Q9QXN0 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Shroom3Q9QXN0 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm12261-201ENSMUST00000117499 645 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm24240-201ENSMUST00000157785 135 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm22011-201ENSMUST00000158790 123 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm26430-201ENSMUST00000178054 107 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Mir6413-201ENSMUST00000184049 108 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Ighv1-6-201ENSMUST00000193849 293 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm43914-201ENSMUST00000203592 594 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm45395-201ENSMUST00000209891 559 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 AC160031.2-201ENSMUST00000218242 274 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 CT009718.4-201ENSMUST00000221881 109 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm26447-201ENSMUST00000082448 129 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm25801-201ENSMUST00000082638 106 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm10222-201ENSMUST00000088336 294 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm11813-201ENSMUST00000118586 291 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm23581-201ENSMUST00000158531 63 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm28717-201ENSMUST00000189950 315 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm19326-201ENSMUST00000219818 326 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Gm2446-201ENSMUST00000220144 772 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 AL606472.1-201ENSMUST00000224628 275 ntBASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Shroom3Q9QXN0 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 Gm8840-201ENSMUST00000122454 386 ntBASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 Gm25718-201ENSMUST00000158632 118 ntBASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 Mir5099-201ENSMUST00000175257 74 ntBASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 Gm29262-201ENSMUST00000190084 196 ntBASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 AC154521.1-201ENSMUST00000222635 330 ntBASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 AC125311.1-201ENSMUST00000226950 220 ntBASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 Gm24817-201ENSMUST00000093672 105 ntBASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Shroom3Q9QXN0 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
Shroom3Q9QXN0 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Shroom3Q9QXN0 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
Shroom3Q9QXN0 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Mir297a-2-201ENSMUST00000103795 90 ntBASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Gm14389-201ENSMUST00000140453 241 ntBASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Gm22037-201ENSMUST00000157280 296 ntBASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Gm16569-201ENSMUST00000160526 314 ntBASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Gm17148-201ENSMUST00000164702 249 ntBASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Gm27308-201ENSMUST00000184807 233 ntBASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Gm44336-201ENSMUST00000203696 468 ntBASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Gm9318-201ENSMUST00000222444 438 ntBASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 AC158982.2-201ENSMUST00000226283 184 ntBASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 AC158142.2-201ENSMUST00000227892 635 ntBASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Gm26263-201ENSMUST00000083281 164 ntBASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Gm23136-201ENSMUST00000083425 99 ntBASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.27□□□□□ -1.89
Shroom3Q9QXN0 Gm18360-201ENSMUST00000173327 1524 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms