Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm23741-201ENSMUST00000097237 171 ntBASIC2.27□□□□□ -2.05
Trem1Q9JKE2 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm22779-201ENSMUST00000104085 107 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm13331-201ENSMUST00000117500 448 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm15844-201ENSMUST00000118016 576 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm16412-201ENSMUST00000121602 273 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm24745-201ENSMUST00000157840 85 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm22611-201ENSMUST00000158288 150 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm10177-202ENSMUST00000161698 207 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm38213-201ENSMUST00000193203 173 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm42647-201ENSMUST00000195939 459 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm44459-201ENSMUST00000203926 160 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm36776-201ENSMUST00000207006 203 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm45513-201ENSMUST00000210228 376 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm46994-201ENSMUST00000221523 219 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm5955-201ENSMUST00000222712 219 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Mir93-201ENSMUST00000083593 88 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Mir465-201ENSMUST00000093563 74 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
Trem1Q9JKE2 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.26□□□□□ -2.05
Trem1Q9JKE2 Gm3563-201ENSMUST00000172963 1628 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Gm5646-201ENSMUST00000120568 714 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Gm24716-201ENSMUST00000157524 104 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Gm22083-201ENSMUST00000157586 102 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Gm24190-201ENSMUST00000157976 216 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Gm26041-201ENSMUST00000158148 108 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Gm22765-201ENSMUST00000158371 128 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Gm27786-201ENSMUST00000184337 70 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Gm6140-201ENSMUST00000192494 966 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Mir703-201ENSMUST00000197105 109 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Gm19089-201ENSMUST00000197207 613 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Gm44594-201ENSMUST00000208982 407 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Gm8940-201ENSMUST00000212585 219 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Gm46389-201ENSMUST00000223199 392 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trem1Q9JKE2 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Trem1Q9JKE2 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Gm22494-201ENSMUST00000104495 128 ntBASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Gm13504-201ENSMUST00000117490 316 ntBASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Gm14748-201ENSMUST00000119819 411 ntBASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Gm11321-201ENSMUST00000121257 902 ntBASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Gm12071-201ENSMUST00000121968 469 ntBASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.24□□□□□ -2.05
Trem1Q9JKE2 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Gm23600-201ENSMUST00000157260 71 ntBASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Gm17063-201ENSMUST00000168135 456 ntBASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Gm28688-201ENSMUST00000187301 268 ntBASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Gm6059-201ENSMUST00000196903 340 ntBASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Ighv1-68-201ENSMUST00000198789 294 ntBASIC2.24□□□□□ -2.05
Trem1Q9JKE2 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.24□□□□□ -2.05
Trem1Q9JKE2 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Trem1Q9JKE2 CT030705.1-201ENSMUST00000223971 533 ntBASIC2.24□□□□□ -2.05
Trem1Q9JKE2 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Gm22061-201ENSMUST00000082557 107 ntBASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Gm26458-201ENSMUST00000082832 128 ntBASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trem1Q9JKE2 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trem1Q9JKE2 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.23□□□□□ -2.05
Trem1Q9JKE2 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trem1Q9JKE2 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
Trem1Q9JKE2 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trem1Q9JKE2 Mir673-201ENSMUST00000102361 91 ntBASIC2.23□□□□□ -2.05
Trem1Q9JKE2 Gm12878-201ENSMUST00000118744 332 ntBASIC2.23□□□□□ -2.05
Trem1Q9JKE2 Gm14292-201ENSMUST00000118761 456 ntBASIC2.23□□□□□ -2.05
Trem1Q9JKE2 Gm6587-201ENSMUST00000120219 613 ntBASIC2.23□□□□□ -2.05
Trem1Q9JKE2 Gm13602-201ENSMUST00000122405 493 ntBASIC2.23□□□□□ -2.05
Trem1Q9JKE2 Gm22956-201ENSMUST00000122520 80 ntBASIC2.23□□□□□ -2.05
Trem1Q9JKE2 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms