Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Gm8532-201ENSMUST00000179174 461 ntBASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Gm26866-201ENSMUST00000180414 802 ntBASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Gm44657-201ENSMUST00000208568 450 ntBASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Gm34783-201ENSMUST00000209159 303 ntBASIC3.49□□□□□ -1.85
Trim54Q9ERP3 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.49□□□□□ -1.85
Trim54Q9ERP3 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Gm22979-201ENSMUST00000082609 159 ntBASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Gm22656-201ENSMUST00000104199 171 ntBASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Mir1198-201ENSMUST00000116995 121 ntBASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Gm15175-201ENSMUST00000117629 132 ntBASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Gm22521-201ENSMUST00000158272 134 ntBASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Gm6374-201ENSMUST00000159051 788 ntBASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Gm17186-201ENSMUST00000171742 456 ntBASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Gm20543-201ENSMUST00000174200 726 ntBASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.48□□□□□ -1.85
Trim54Q9ERP3 AC116589.3-202ENSMUST00000221770 649 ntBASIC3.48□□□□□ -1.85
Trim54Q9ERP3 AC116589.6-201ENSMUST00000222252 649 ntBASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Trim54Q9ERP3 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Gm11386-201ENSMUST00000117761 347 ntBASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Gm22957-201ENSMUST00000122511 123 ntBASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Gm25391-201ENSMUST00000157342 134 ntBASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Gm18520-201ENSMUST00000174783 658 ntBASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Gm27385-201ENSMUST00000184747 104 ntBASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Ighv12-1-201ENSMUST00000195542 329 ntBASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Gm43415-201ENSMUST00000201934 750 ntBASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Gm44964-201ENSMUST00000207011 273 ntBASIC3.47□□□□□ -1.85
Trim54Q9ERP3 AC109212.1-201ENSMUST00000215561 427 ntBASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trim54Q9ERP3 AC116589.4-201ENSMUST00000222390 216 ntBASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Gm23515-201ENSMUST00000082829 107 ntBASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Gm24045-201ENSMUST00000083113 98 ntBASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Gm23850-201ENSMUST00000083830 169 ntBASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.47□□□□□ -1.85
Trim54Q9ERP3 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Trim54Q9ERP3 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm26423-201ENSMUST00000104277 128 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm26147-201ENSMUST00000104479 114 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm22496-201ENSMUST00000104493 88 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm14355-201ENSMUST00000117352 264 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm12191-201ENSMUST00000118307 348 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm9703-201ENSMUST00000119573 343 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm15807-201ENSMUST00000119880 1128 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm14333-201ENSMUST00000130484 264 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm22038-201ENSMUST00000157277 242 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm24720-201ENSMUST00000157518 166 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm26159-201ENSMUST00000158968 104 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm10075-201ENSMUST00000162030 545 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm25175-201ENSMUST00000178712 79 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm25314-201ENSMUST00000178810 79 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Mir7093-201ENSMUST00000184195 101 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm27245-201ENSMUST00000184385 376 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm28650-201ENSMUST00000188413 411 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm28506-201ENSMUST00000189937 150 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm7858-201ENSMUST00000190177 622 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm18291-201ENSMUST00000190791 301 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm37455-201ENSMUST00000191993 529 ntBASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.46□□□□□ -1.86
Trim54Q9ERP3 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms