Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm18397-201ENSMUST00000176704 587 ntBASIC2.04□□□□□ -2.08
Lima1Q9ERG0 Gm24304-201ENSMUST00000177635 107 ntBASIC2.04□□□□□ -2.08
Lima1Q9ERG0 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Lima1Q9ERG0 Gm29460-201ENSMUST00000188607 714 ntBASIC2.04□□□□□ -2.08
Lima1Q9ERG0 Gm37533-201ENSMUST00000193848 545 ntBASIC2.04□□□□□ -2.08
Lima1Q9ERG0 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.04□□□□□ -2.08
Lima1Q9ERG0 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Lima1Q9ERG0 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC2.04□□□□□ -2.08
Lima1Q9ERG0 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.04□□□□□ -2.08
Lima1Q9ERG0 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Lima1Q9ERG0 Gm20948-201ENSMUST00000211091 449 ntBASIC2.04□□□□□ -2.08
Lima1Q9ERG0 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Lima1Q9ERG0 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.04□□□□□ -2.08
Lima1Q9ERG0 Gm46193-201ENSMUST00000219399 364 ntBASIC2.04□□□□□ -2.08
Lima1Q9ERG0 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.04□□□□□ -2.08
Lima1Q9ERG0 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.04□□□□□ -2.08
Lima1Q9ERG0 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Lima1Q9ERG0 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Lima1Q9ERG0 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Lima1Q9ERG0 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.04□□□□□ -2.08
Lima1Q9ERG0 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Gm13406-201ENSMUST00000121991 256 ntBASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Gm22037-201ENSMUST00000157280 296 ntBASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Gm23324-201ENSMUST00000157421 131 ntBASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Gm17038-201ENSMUST00000166586 494 ntBASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Gm37081-201ENSMUST00000192034 196 ntBASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Gm43587-201ENSMUST00000199590 204 ntBASIC2.03□□□□□ -2.08
Lima1Q9ERG0 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Gm44938-201ENSMUST00000208614 427 ntBASIC2.03□□□□□ -2.08
Lima1Q9ERG0 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.03□□□□□ -2.08
Lima1Q9ERG0 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Gm25402-201ENSMUST00000082966 131 ntBASIC2.03□□□□□ -2.08
Lima1Q9ERG0 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Lima1Q9ERG0 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
Lima1Q9ERG0 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Gm23691-201ENSMUST00000101878 107 ntBASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Gm22270-201ENSMUST00000104034 132 ntBASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Gm26015-201ENSMUST00000104402 125 ntBASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Gm24068-201ENSMUST00000104513 132 ntBASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Gm25529-201ENSMUST00000104850 92 ntBASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Gm7974-201ENSMUST00000117154 408 ntBASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Gm24911-201ENSMUST00000157292 136 ntBASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Gm23137-201ENSMUST00000157559 107 ntBASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Gm17063-201ENSMUST00000168135 456 ntBASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Gm27964-201ENSMUST00000185195 62 ntBASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Trbv18-201ENSMUST00000194256 294 ntBASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Gm37989-201ENSMUST00000195202 803 ntBASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Lima1Q9ERG0 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Lima1Q9ERG0 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Lima1Q9ERG0 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Lima1Q9ERG0 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.01□□□□□ -2.09
Lima1Q9ERG0 Gm22494-201ENSMUST00000104495 128 ntBASIC2.01□□□□□ -2.09
Lima1Q9ERG0 Gm13239-201ENSMUST00000119920 637 ntBASIC2.01□□□□□ -2.09
Lima1Q9ERG0 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC2.01□□□□□ -2.09
Lima1Q9ERG0 Gm13194-201ENSMUST00000142299 311 ntBASIC2.01□□□□□ -2.09
Lima1Q9ERG0 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC2.01□□□□□ -2.09
Lima1Q9ERG0 Gm24010-201ENSMUST00000157731 282 ntBASIC2.01□□□□□ -2.09
Lima1Q9ERG0 Mir5101-201ENSMUST00000175181 83 ntBASIC2.01□□□□□ -2.09
Lima1Q9ERG0 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Lima1Q9ERG0 Gm26622-201ENSMUST00000180520 298 ntBASIC2.01□□□□□ -2.09
Lima1Q9ERG0 Gm27342-201ENSMUST00000183530 109 ntBASIC2.01□□□□□ -2.09
Lima1Q9ERG0 Gm18667-201ENSMUST00000186523 484 ntBASIC2.01□□□□□ -2.09
Lima1Q9ERG0 Gm17893-201ENSMUST00000203017 770 ntBASIC2.01□□□□□ -2.09
Lima1Q9ERG0 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.01□□□□□ -2.09
Lima1Q9ERG0 Gm18242-201ENSMUST00000218455 542 ntBASIC2.01□□□□□ -2.09
Lima1Q9ERG0 CT009764.1-201ENSMUST00000222260 483 ntBASIC2.01□□□□□ -2.09
Lima1Q9ERG0 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.01□□□□□ -2.09
Lima1Q9ERG0 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC2.01□□□□□ -2.09
Lima1Q9ERG0 Gm26128-201ENSMUST00000083170 110 ntBASIC2.01□□□□□ -2.09
Lima1Q9ERG0 Gm24254-201ENSMUST00000083702 104 ntBASIC2.01□□□□□ -2.09
Lima1Q9ERG0 Gm5596-201ENSMUST00000207988 2421 ntBASIC2□□□□□ -2.09
Lima1Q9ERG0 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
Lima1Q9ERG0 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
Lima1Q9ERG0 Gm15846-201ENSMUST00000116022 320 ntBASIC2□□□□□ -2.09
Lima1Q9ERG0 Gm14238-201ENSMUST00000120227 323 ntBASIC2□□□□□ -2.09
Lima1Q9ERG0 Gm14915-201ENSMUST00000120747 204 ntBASIC2□□□□□ -2.09
Lima1Q9ERG0 Gm3025-201ENSMUST00000163454 489 ntBASIC2□□□□□ -2.09
Lima1Q9ERG0 Gm17119-201ENSMUST00000163943 280 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms