Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm23328-201ENSMUST00000157418 132 ntBASIC1.67□□□□□ -2.14
Cpsf1Q9EPU4 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Cpsf1Q9EPU4 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Cpsf1Q9EPU4 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Cpsf1Q9EPU4 Gm31532-201ENSMUST00000203555 767 ntBASIC1.67□□□□□ -2.14
Cpsf1Q9EPU4 Crs-ps-201ENSMUST00000203723 760 ntBASIC1.67□□□□□ -2.14
Cpsf1Q9EPU4 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Cpsf1Q9EPU4 Gm19137-201ENSMUST00000213790 1164 ntBASIC1.67□□□□□ -2.14
Cpsf1Q9EPU4 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.67□□□□□ -2.14
Cpsf1Q9EPU4 AC163664.1-201ENSMUST00000226251 1248 ntBASIC1.67□□□□□ -2.14
Cpsf1Q9EPU4 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Cpsf1Q9EPU4 Gm19074-201ENSMUST00000218915 1429 ntBASIC1.67□□□□□ -2.14
Cpsf1Q9EPU4 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Mir5136-201ENSMUST00000175573 76 ntBASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Gm27921-201ENSMUST00000183968 108 ntBASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Gm6060-201ENSMUST00000188671 251 ntBASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Gm33866-201ENSMUST00000196911 289 ntBASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Gm20948-201ENSMUST00000211091 449 ntBASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Gm18188-201ENSMUST00000219386 478 ntBASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Gm15443-201ENSMUST00000118947 820 ntBASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Gm15275-201ENSMUST00000154752 347 ntBASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Mir7663-201ENSMUST00000183950 61 ntBASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.66□□□□□ -2.14
Cpsf1Q9EPU4 Gm42968-201ENSMUST00000198578 1372 ntBASIC1.65□□□□□ -2.15
Cpsf1Q9EPU4 Gm21885-201ENSMUST00000178891 327 ntBASIC1.65□□□□□ -2.15
Cpsf1Q9EPU4 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC1.65□□□□□ -2.15
Cpsf1Q9EPU4 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Cpsf1Q9EPU4 Gm19237-201ENSMUST00000205036 1132 ntBASIC1.65□□□□□ -2.15
Cpsf1Q9EPU4 Gm7751-201ENSMUST00000212868 709 ntBASIC1.65□□□□□ -2.15
Cpsf1Q9EPU4 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
Cpsf1Q9EPU4 Gm7739-201ENSMUST00000221131 1560 ntBASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 Gm14215-201ENSMUST00000120578 221 ntBASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 Gm15147-201ENSMUST00000122263 483 ntBASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 Gm16363-201ENSMUST00000132460 877 ntBASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 Gm22565-201ENSMUST00000175540 69 ntBASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 Gm42454-201ENSMUST00000196805 1181 ntBASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 Gm22980-201ENSMUST00000082608 70 ntBASIC1.64□□□□□ -2.15
Cpsf1Q9EPU4 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.63□□□□□ -2.15
Cpsf1Q9EPU4 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Cpsf1Q9EPU4 Gm23015-201ENSMUST00000104145 128 ntBASIC1.63□□□□□ -2.15
Cpsf1Q9EPU4 Gm24630-201ENSMUST00000122768 106 ntBASIC1.63□□□□□ -2.15
Cpsf1Q9EPU4 Gm37676-201ENSMUST00000195496 507 ntBASIC1.63□□□□□ -2.15
Cpsf1Q9EPU4 Gm45049-201ENSMUST00000207586 591 ntBASIC1.63□□□□□ -2.15
Cpsf1Q9EPU4 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Cpsf1Q9EPU4 Gm24261-201ENSMUST00000083744 104 ntBASIC1.63□□□□□ -2.15
Cpsf1Q9EPU4 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.62□□□□□ -2.15
Cpsf1Q9EPU4 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC1.62□□□□□ -2.15
Cpsf1Q9EPU4 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
Cpsf1Q9EPU4 Gm23886-201ENSMUST00000122684 313 ntBASIC1.62□□□□□ -2.15
Cpsf1Q9EPU4 Gm24632-201ENSMUST00000122770 323 ntBASIC1.62□□□□□ -2.15
Cpsf1Q9EPU4 Gm24942-201ENSMUST00000158328 114 ntBASIC1.62□□□□□ -2.15
Cpsf1Q9EPU4 Gm25520-201ENSMUST00000158389 118 ntBASIC1.62□□□□□ -2.15
Cpsf1Q9EPU4 Mir6381-201ENSMUST00000183426 87 ntBASIC1.62□□□□□ -2.15
Cpsf1Q9EPU4 Gm27160-201ENSMUST00000184837 199 ntBASIC1.62□□□□□ -2.15
Cpsf1Q9EPU4 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.62□□□□□ -2.15
Cpsf1Q9EPU4 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Cpsf1Q9EPU4 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.62□□□□□ -2.15
Cpsf1Q9EPU4 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.62□□□□□ -2.15
Cpsf1Q9EPU4 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Cpsf1Q9EPU4 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC1.61□□□□□ -2.15
Cpsf1Q9EPU4 Gm24865-201ENSMUST00000103246 96 ntBASIC1.61□□□□□ -2.15
Cpsf1Q9EPU4 Gm16331-201ENSMUST00000144274 498 ntBASIC1.61□□□□□ -2.15
Cpsf1Q9EPU4 Gm25715-201ENSMUST00000158627 125 ntBASIC1.61□□□□□ -2.15
Cpsf1Q9EPU4 Gm6651-201ENSMUST00000189471 271 ntBASIC1.61□□□□□ -2.15
Cpsf1Q9EPU4 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Cpsf1Q9EPU4 Gm38329-201ENSMUST00000193473 427 ntBASIC1.61□□□□□ -2.15
Cpsf1Q9EPU4 Gm43659-201ENSMUST00000200894 628 ntBASIC1.61□□□□□ -2.15
Cpsf1Q9EPU4 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.61□□□□□ -2.15
Cpsf1Q9EPU4 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.61□□□□□ -2.15
Cpsf1Q9EPU4 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.61□□□□□ -2.15
Cpsf1Q9EPU4 Gm14867-201ENSMUST00000120156 866 ntBASIC1.6□□□□□ -2.15
Cpsf1Q9EPU4 Gm12372-201ENSMUST00000121654 768 ntBASIC1.6□□□□□ -2.15
Cpsf1Q9EPU4 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC1.6□□□□□ -2.15
Cpsf1Q9EPU4 Gm25658-201ENSMUST00000158472 128 ntBASIC1.6□□□□□ -2.15
Cpsf1Q9EPU4 Gm25768-201ENSMUST00000158570 98 ntBASIC1.6□□□□□ -2.15
Cpsf1Q9EPU4 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms