Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC115047.1-201ENSMUST00000213795 322 ntBASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Cdc40Q9DC48 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Snord104-201ENSMUST00000083192 70 ntBASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Gm25213-201ENSMUST00000102388 113 ntBASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Gm26342-201ENSMUST00000104557 129 ntBASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Gm6923-201ENSMUST00000118343 406 ntBASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Gm26186-201ENSMUST00000157689 125 ntBASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Gm24771-201ENSMUST00000158508 137 ntBASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Gm22666-201ENSMUST00000158717 164 ntBASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Gm28412-201ENSMUST00000187243 177 ntBASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Gm19224-201ENSMUST00000190477 793 ntBASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Gm37533-201ENSMUST00000193848 545 ntBASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Gm43193-201ENSMUST00000197732 441 ntBASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Gm44161-201ENSMUST00000203532 253 ntBASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Gm45439-201ENSMUST00000211723 359 ntBASIC2.26□□□□□ -2.05
Cdc40Q9DC48 CT009764.1-201ENSMUST00000222260 483 ntBASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Gm22265-201ENSMUST00000082947 116 ntBASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Cdc40Q9DC48 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm650-201ENSMUST00000144428 1551 ntBASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm22750-201ENSMUST00000102076 103 ntBASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm15223-201ENSMUST00000120989 826 ntBASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm23889-201ENSMUST00000122689 104 ntBASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm23476-201ENSMUST00000158881 274 ntBASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm2966-201ENSMUST00000166052 481 ntBASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm26177-201ENSMUST00000178683 107 ntBASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm25873-201ENSMUST00000180317 107 ntBASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm28755-201ENSMUST00000185773 199 ntBASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm29335-201ENSMUST00000188361 459 ntBASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm43669-201ENSMUST00000198229 436 ntBASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm46136-201ENSMUST00000214730 565 ntBASIC2.25□□□□□ -2.05
Cdc40Q9DC48 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.25□□□□□ -2.05
Cdc40Q9DC48 AC141642.1-201ENSMUST00000220598 229 ntBASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Cdc40Q9DC48 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Cdc40Q9DC48 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Gm14073-201ENSMUST00000117344 381 ntBASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Gm12372-201ENSMUST00000121654 768 ntBASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Gm23980-201ENSMUST00000157135 158 ntBASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Gm25392-201ENSMUST00000157335 297 ntBASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Gm23137-201ENSMUST00000157559 107 ntBASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Gm23033-201ENSMUST00000157996 134 ntBASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Gm24212-201ENSMUST00000158258 132 ntBASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.24□□□□□ -2.05
Cdc40Q9DC48 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Gm44391-201ENSMUST00000198490 93 ntBASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Gm19649-201ENSMUST00000201126 822 ntBASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.24□□□□□ -2.05
Cdc40Q9DC48 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.24□□□□□ -2.05
Cdc40Q9DC48 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Gm23247-201ENSMUST00000083373 107 ntBASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Gm24698-201ENSMUST00000083883 130 ntBASIC2.24□□□□□ -2.05
Cdc40Q9DC48 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
Cdc40Q9DC48 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.23□□□□□ -2.05
Cdc40Q9DC48 Gm14594-201ENSMUST00000118052 537 ntBASIC2.23□□□□□ -2.05
Cdc40Q9DC48 Gm13640-201ENSMUST00000118445 264 ntBASIC2.23□□□□□ -2.05
Cdc40Q9DC48 Gm14590-201ENSMUST00000118934 537 ntBASIC2.23□□□□□ -2.05
Cdc40Q9DC48 Gm15029-201ENSMUST00000119742 199 ntBASIC2.23□□□□□ -2.05
Cdc40Q9DC48 Gm14867-201ENSMUST00000120156 866 ntBASIC2.23□□□□□ -2.05
Cdc40Q9DC48 Gm12006-201ENSMUST00000120786 403 ntBASIC2.23□□□□□ -2.05
Cdc40Q9DC48 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.23□□□□□ -2.05
Cdc40Q9DC48 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Cdc40Q9DC48 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Cdc40Q9DC48 Gm22765-201ENSMUST00000158371 128 ntBASIC2.23□□□□□ -2.05
Cdc40Q9DC48 Gm17154-201ENSMUST00000165748 431 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms