Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim42Q9D2H5 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim42Q9D2H5 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim42Q9D2H5 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim42Q9D2H5 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Trim42Q9D2H5 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.54□□□□□ -1.68
Trim42Q9D2H5 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.54□□□□□ -1.68
Trim42Q9D2H5 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Gm24671-201ENSMUST00000104159 158 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Gm12191-201ENSMUST00000118307 348 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Gm14067-201ENSMUST00000119340 314 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Gm9703-201ENSMUST00000119573 343 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Gm9003-201ENSMUST00000121810 482 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Gm23640-201ENSMUST00000157860 104 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Gm25447-201ENSMUST00000158997 128 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Gm20450-201ENSMUST00000173652 147 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Gm6651-201ENSMUST00000189471 271 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Gm37162-201ENSMUST00000191708 551 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Gm44657-201ENSMUST00000208568 450 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Mir202-201ENSMUST00000083568 72 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Mir10a-201ENSMUST00000083585 110 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Mir337-201ENSMUST00000083592 97 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Gm10343-201ENSMUST00000096279 348 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Gm42447-201ENSMUST00000200102 2903 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim42Q9D2H5 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Gm26500-201ENSMUST00000101867 106 ntBASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Mir466p-201ENSMUST00000103925 89 ntBASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Gm23651-201ENSMUST00000116755 120 ntBASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Gm15180-201ENSMUST00000117745 492 ntBASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Gm12112-201ENSMUST00000117772 231 ntBASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Gm13687-201ENSMUST00000119857 282 ntBASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Gm12640-201ENSMUST00000120097 310 ntBASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Gm11204-201ENSMUST00000122438 147 ntBASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Gm20651-201ENSMUST00000177219 329 ntBASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Gm28344-201ENSMUST00000185704 279 ntBASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Gm43408-201ENSMUST00000198263 440 ntBASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Gm24611-201ENSMUST00000083272 107 ntBASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Mir188-201ENSMUST00000083464 68 ntBASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Mir28a-201ENSMUST00000083560 86 ntBASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Mir32-201ENSMUST00000083610 70 ntBASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Gm10351-201ENSMUST00000087694 125 ntBASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim42Q9D2H5 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.52□□□□□ -1.69
Trim42Q9D2H5 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Synpr-207ENSMUST00000223583 3362 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Gm14304-201ENSMUST00000117272 446 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Gm12550-201ENSMUST00000118478 329 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Gm5391-201ENSMUST00000121155 613 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Gm23781-201ENSMUST00000157940 308 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Gm25863-201ENSMUST00000158249 329 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Gm25906-201ENSMUST00000158489 126 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Gm17187-201ENSMUST00000164622 410 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Gm18520-201ENSMUST00000174783 658 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Gm7825-201ENSMUST00000204046 416 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 AC155715.1-201ENSMUST00000213575 463 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Gm30674-201ENSMUST00000214523 392 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 AC153800.1-201ENSMUST00000219212 365 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Gm8274-201ENSMUST00000219820 463 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 AC121942.2-201ENSMUST00000223824 600 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Gm25800-201ENSMUST00000082636 134 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.51□□□□□ -1.69
Trim42Q9D2H5 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms