Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 AC122887.2-201ENSMUST00000219465 1603 ntBASIC3.84□□□□□ -1.8
Ddx56Q9D0R4 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Gm14448-201ENSMUST00000116383 210 ntBASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Gm14119-201ENSMUST00000119511 235 ntBASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Gm14551-201ENSMUST00000120802 256 ntBASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Snord92-201ENSMUST00000175548 85 ntBASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Gm29064-201ENSMUST00000187014 813 ntBASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Gm37399-201ENSMUST00000195224 416 ntBASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Gm18341-201ENSMUST00000197538 622 ntBASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Gm25205-201ENSMUST00000082841 103 ntBASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Ddx56Q9D0R4 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Gm42606-201ENSMUST00000114209 239 ntBASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Gm14681-201ENSMUST00000118047 411 ntBASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Gm26149-201ENSMUST00000157432 108 ntBASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Gm24577-201ENSMUST00000158580 63 ntBASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Gm27903-201ENSMUST00000175482 126 ntBASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Gm37239-201ENSMUST00000193510 141 ntBASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Gm43723-201ENSMUST00000196886 189 ntBASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Gm17990-201ENSMUST00000211728 553 ntBASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 AC164567.2-201ENSMUST00000219363 445 ntBASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ddx56Q9D0R4 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Gm13339-201ENSMUST00000120651 510 ntBASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Gm26276-201ENSMUST00000157099 109 ntBASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Gm23137-201ENSMUST00000157559 107 ntBASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Gm3470-201ENSMUST00000160819 420 ntBASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Gm15900-201ENSMUST00000161584 342 ntBASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Mir5099-201ENSMUST00000175257 74 ntBASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Gm25360-201ENSMUST00000178786 191 ntBASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Gm38238-201ENSMUST00000194334 346 ntBASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Gm38041-201ENSMUST00000194445 661 ntBASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Gm37417-201ENSMUST00000195257 454 ntBASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Gm30674-201ENSMUST00000214523 392 ntBASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Gm10264-201ENSMUST00000220589 429 ntBASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 AC074315.1-201ENSMUST00000228801 214 ntBASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.81□□□□□ -1.8
Ddx56Q9D0R4 Gm18360-201ENSMUST00000173327 1524 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Mir743b-201ENSMUST00000104751 77 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm11704-201ENSMUST00000120031 214 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm7071-201ENSMUST00000120458 462 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm16005-201ENSMUST00000120515 269 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm12578-201ENSMUST00000121244 417 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm25909-201ENSMUST00000157619 121 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm24853-201ENSMUST00000158026 121 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm24739-201ENSMUST00000158855 292 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm3027-201ENSMUST00000167579 451 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm28010-201ENSMUST00000179485 126 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm26585-201ENSMUST00000180890 630 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms