Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm25606-201ENSMUST00000158363 95 ntBASIC4.09□□□□□ -1.75
Ssu72Q9CY97 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ssu72Q9CY97 Gm17159-201ENSMUST00000169043 482 ntBASIC4.09□□□□□ -1.75
Ssu72Q9CY97 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Ssu72Q9CY97 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.09□□□□□ -1.75
Ssu72Q9CY97 Gm38183-201ENSMUST00000193189 205 ntBASIC4.09□□□□□ -1.75
Ssu72Q9CY97 Gm29704-201ENSMUST00000196011 253 ntBASIC4.09□□□□□ -1.75
Ssu72Q9CY97 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.09□□□□□ -1.75
Ssu72Q9CY97 Gm45002-201ENSMUST00000208045 120 ntBASIC4.09□□□□□ -1.75
Ssu72Q9CY97 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC4.09□□□□□ -1.75
Ssu72Q9CY97 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.09□□□□□ -1.75
Ssu72Q9CY97 Gm6049-201ENSMUST00000222369 458 ntBASIC4.09□□□□□ -1.75
Ssu72Q9CY97 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.09□□□□□ -1.75
Ssu72Q9CY97 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Gm22473-201ENSMUST00000104114 132 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 n-R5s16-201ENSMUST00000104555 119 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Gm15560-201ENSMUST00000117107 643 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Gm15905-201ENSMUST00000137042 298 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Gm25967-201ENSMUST00000157168 147 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Gm22145-201ENSMUST00000157396 148 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Gm23753-201ENSMUST00000157575 149 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Gm24005-201ENSMUST00000158459 296 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Gm23355-201ENSMUST00000177614 107 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Gm23148-201ENSMUST00000180367 107 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Gm27928-201ENSMUST00000183747 256 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Gm29429-201ENSMUST00000187071 121 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Ighv1-27-201ENSMUST00000194473 340 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Gm38088-201ENSMUST00000195829 241 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Gm35702-201ENSMUST00000198653 511 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Gm32222-201ENSMUST00000203296 298 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Gm43955-201ENSMUST00000204332 142 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Gm44030-201ENSMUST00000204865 432 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Ssu72Q9CY97 AC105958.2-201ENSMUST00000214167 191 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Gm25078-201ENSMUST00000082530 107 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 n-R5s173-201ENSMUST00000082620 119 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Ssu72Q9CY97 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Ssu72Q9CY97 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Ssu72Q9CY97 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Ssu72Q9CY97 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Gm14846-201ENSMUST00000121868 216 ntBASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Gm23752-201ENSMUST00000157584 115 ntBASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Gm26412-201ENSMUST00000157666 55 ntBASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Gm3370-201ENSMUST00000171785 500 ntBASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Gm22308-201ENSMUST00000177609 107 ntBASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Gm26928-201ENSMUST00000182674 572 ntBASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Gm27545-201ENSMUST00000184755 202 ntBASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Mir6715-201ENSMUST00000184990 57 ntBASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Gm17775-201ENSMUST00000198542 258 ntBASIC4.07□□□□□ -1.76
Ssu72Q9CY97 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Gm23928-201ENSMUST00000082469 145 ntBASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ssu72Q9CY97 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ssu72Q9CY97 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Ssu72Q9CY97 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
Ssu72Q9CY97 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.06□□□□□ -1.76
Ssu72Q9CY97 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
Ssu72Q9CY97 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ssu72Q9CY97 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.06□□□□□ -1.76
Ssu72Q9CY97 Gm24318-201ENSMUST00000104490 131 ntBASIC4.06□□□□□ -1.76
Ssu72Q9CY97 Mir294-201ENSMUST00000104710 84 ntBASIC4.06□□□□□ -1.76
Ssu72Q9CY97 Gm13343-201ENSMUST00000116474 105 ntBASIC4.06□□□□□ -1.76
Ssu72Q9CY97 Gm14971-201ENSMUST00000117980 663 ntBASIC4.06□□□□□ -1.76
Ssu72Q9CY97 Gm5123-201ENSMUST00000121905 837 ntBASIC4.06□□□□□ -1.76
Ssu72Q9CY97 Gm22984-201ENSMUST00000122751 122 ntBASIC4.06□□□□□ -1.76
Ssu72Q9CY97 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.06□□□□□ -1.76
Ssu72Q9CY97 Gm5755-201ENSMUST00000152394 837 ntBASIC4.06□□□□□ -1.76
Ssu72Q9CY97 Gm25054-201ENSMUST00000157370 97 ntBASIC4.06□□□□□ -1.76
Ssu72Q9CY97 Gm23250-201ENSMUST00000157444 267 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms