Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm11456-201ENSMUST00000121070 256 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm6762-201ENSMUST00000121769 289 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 n-R5s179-201ENSMUST00000122564 118 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm23470-201ENSMUST00000157129 120 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm23168-201ENSMUST00000157156 143 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm24546-201ENSMUST00000158652 102 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm27317-201ENSMUST00000183533 95 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm27608-201ENSMUST00000184822 162 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm37104-201ENSMUST00000193278 196 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm44142-201ENSMUST00000203358 311 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm44824-201ENSMUST00000207021 229 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 AC069561.2-201ENSMUST00000217596 420 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm46312-201ENSMUST00000220961 420 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 AC134860.6-201ENSMUST00000226038 285 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm24045-201ENSMUST00000083113 98 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm26504-201ENSMUST00000102033 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm24127-201ENSMUST00000104110 130 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm13343-201ENSMUST00000116474 105 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm22026-201ENSMUST00000122735 281 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm23865-201ENSMUST00000157723 97 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm16289-201ENSMUST00000162079 183 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Mir5136-201ENSMUST00000175573 76 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm26502-201ENSMUST00000177732 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm25350-201ENSMUST00000177849 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm23446-201ENSMUST00000177977 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm26201-201ENSMUST00000178047 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm24711-201ENSMUST00000178062 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm24609-201ENSMUST00000178166 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm23265-201ENSMUST00000178321 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm22812-201ENSMUST00000178329 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm26246-201ENSMUST00000178388 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm25155-201ENSMUST00000178450 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm24760-201ENSMUST00000178530 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm22285-201ENSMUST00000178576 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm22417-201ENSMUST00000178656 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm26270-201ENSMUST00000178690 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm23313-201ENSMUST00000178931 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm23089-201ENSMUST00000178947 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm24153-201ENSMUST00000179280 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm25597-201ENSMUST00000179388 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm25816-201ENSMUST00000179764 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm26188-201ENSMUST00000179963 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm26433-201ENSMUST00000180227 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm22128-201ENSMUST00000180346 94 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm27245-201ENSMUST00000184385 376 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm28002-201ENSMUST00000184832 100 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm28069-201ENSMUST00000189926 214 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm29184-201ENSMUST00000190038 334 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm7858-201ENSMUST00000190177 622 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm37523-201ENSMUST00000194901 412 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm18696-201ENSMUST00000220103 274 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm9765-201ENSMUST00000043170 321 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms