Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm11813-201ENSMUST00000118586 291 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Gm7209-201ENSMUST00000122339 333 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Gm25102-201ENSMUST00000122479 112 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 DQ267100-201ENSMUST00000122600 72 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Gm16218-201ENSMUST00000155424 388 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Gm24241-201ENSMUST00000157787 145 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Gm23317-201ENSMUST00000157999 129 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Gm24922-201ENSMUST00000158511 102 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Gm20718-201ENSMUST00000176058 259 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Gm23145-201ENSMUST00000178912 79 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Mir7013-201ENSMUST00000183540 72 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Gm37568-201ENSMUST00000191755 364 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Gm44254-201ENSMUST00000204184 322 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Gm34701-202ENSMUST00000204685 360 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.96□□□□□ -1.94
Smc1aQ9CU62 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Smc1aQ9CU62 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Gm22265-201ENSMUST00000082947 116 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Gm10343-201ENSMUST00000096279 348 ntBASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Smc1aQ9CU62 Zfp640-202ENSMUST00000224116 1562 ntBASIC2.95□□□□□ -1.94
Smc1aQ9CU62 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gm12617-201ENSMUST00000121268 381 ntBASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gm22651-201ENSMUST00000157872 94 ntBASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gm24436-201ENSMUST00000157889 302 ntBASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gm25707-201ENSMUST00000175120 96 ntBASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gm20660-201ENSMUST00000177515 289 ntBASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gm22131-201ENSMUST00000178415 94 ntBASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gm21726-201ENSMUST00000179654 392 ntBASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Mir7068-201ENSMUST00000183439 74 ntBASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Mir7242-201ENSMUST00000183710 79 ntBASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gm17929-201ENSMUST00000186851 627 ntBASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gm18341-201ENSMUST00000197538 622 ntBASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.95□□□□□ -1.94
Smc1aQ9CU62 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gm43600-201ENSMUST00000202134 223 ntBASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Gm44295-201ENSMUST00000203805 437 ntBASIC2.95□□□□□ -1.94
Smc1aQ9CU62 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Smc1aQ9CU62 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.94□□□□□ -1.94
Smc1aQ9CU62 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Smc1aQ9CU62 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
Smc1aQ9CU62 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Smc1aQ9CU62 Gm25414-201ENSMUST00000101814 107 ntBASIC2.94□□□□□ -1.94
Smc1aQ9CU62 Gm14579-201ENSMUST00000117068 283 ntBASIC2.94□□□□□ -1.94
Smc1aQ9CU62 Gm11943-201ENSMUST00000119473 327 ntBASIC2.94□□□□□ -1.94
Smc1aQ9CU62 Gm8880-201ENSMUST00000121800 454 ntBASIC2.94□□□□□ -1.94
Smc1aQ9CU62 Gm24836-201ENSMUST00000122609 108 ntBASIC2.94□□□□□ -1.94
Smc1aQ9CU62 Gm24475-201ENSMUST00000157435 143 ntBASIC2.94□□□□□ -1.94
Smc1aQ9CU62 Gm24962-201ENSMUST00000157917 109 ntBASIC2.94□□□□□ -1.94
Smc1aQ9CU62 Gm3102-201ENSMUST00000164236 489 ntBASIC2.94□□□□□ -1.94
Smc1aQ9CU62 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.94□□□□□ -1.94
Smc1aQ9CU62 Gm37533-201ENSMUST00000193848 545 ntBASIC2.94□□□□□ -1.94
Smc1aQ9CU62 Gm43026-201ENSMUST00000202972 325 ntBASIC2.94□□□□□ -1.94
Smc1aQ9CU62 Gm45048-201ENSMUST00000207058 429 ntBASIC2.94□□□□□ -1.94
Smc1aQ9CU62 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Smc1aQ9CU62 AC192616.1-201ENSMUST00000221922 132 ntBASIC2.94□□□□□ -1.94
Smc1aQ9CU62 CR974485.1-201ENSMUST00000222408 402 ntBASIC2.94□□□□□ -1.94
Smc1aQ9CU62 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.94□□□□□ -1.94
Smc1aQ9CU62 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Smc1aQ9CU62 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC2.94□□□□□ -1.94
Smc1aQ9CU62 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Smc1aQ9CU62 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.94□□□□□ -1.94
Smc1aQ9CU62 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm22486-201ENSMUST00000116815 137 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm12598-201ENSMUST00000117333 830 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm15177-201ENSMUST00000120491 577 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm11556-201ENSMUST00000120751 288 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm2768-201ENSMUST00000121062 250 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm12045-201ENSMUST00000122122 573 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm26271-201ENSMUST00000158349 104 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Mir5099-201ENSMUST00000175257 74 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Snord93-201ENSMUST00000175580 71 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm29263-201ENSMUST00000188718 463 ntBASIC2.93□□□□□ -1.94
Smc1aQ9CU62 Gm28384-201ENSMUST00000189079 463 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms