Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Rpa3Q9CQ71 Gm5471-201ENSMUST00000072732 337 ntBASIC2.05□□□□□ -2.08
Rpa3Q9CQ71 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Rpa3Q9CQ71 Gm21286-201ENSMUST00000098035 545 ntBASIC2.05□□□□□ -2.08
Rpa3Q9CQ71 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Gm7429-201ENSMUST00000118664 348 ntBASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Gm14292-201ENSMUST00000118761 456 ntBASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Gm14669-201ENSMUST00000118841 250 ntBASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Gm22192-201ENSMUST00000175128 85 ntBASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Gm29641-201ENSMUST00000188955 259 ntBASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Trbv6-201ENSMUST00000193743 276 ntBASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Gm19089-201ENSMUST00000197207 613 ntBASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Trdv3-201ENSMUST00000198551 309 ntBASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Gm44938-201ENSMUST00000208614 427 ntBASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Gm19118-201ENSMUST00000222554 98 ntBASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Gm25632-201ENSMUST00000083112 85 ntBASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Rpa3Q9CQ71 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 Trav20-201ENSMUST00000142754 347 ntBASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 Gm26105-201ENSMUST00000157253 190 ntBASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 Gm22227-201ENSMUST00000157356 259 ntBASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 Gm22885-201ENSMUST00000157410 107 ntBASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 Gm27979-201ENSMUST00000185126 56 ntBASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 Gm27959-201ENSMUST00000185172 111 ntBASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 Gm28627-201ENSMUST00000186141 453 ntBASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 Gm28951-201ENSMUST00000190742 313 ntBASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 Gm32033-201ENSMUST00000193483 339 ntBASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 Gm46193-201ENSMUST00000219399 364 ntBASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 AC154552.4-201ENSMUST00000222171 151 ntBASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 AC154692.1-201ENSMUST00000228314 544 ntBASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Rpa3Q9CQ71 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
Rpa3Q9CQ71 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Gm14815-201ENSMUST00000120060 488 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Gm12881-201ENSMUST00000121191 203 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Gm24770-201ENSMUST00000158505 92 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Gm23548-201ENSMUST00000158963 106 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Mir6901-201ENSMUST00000185062 62 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Gm20776-201ENSMUST00000189940 700 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Gm44041-201ENSMUST00000203678 396 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Gm44212-201ENSMUST00000205016 897 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Gm20948-201ENSMUST00000211091 449 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 AC172027.1-201ENSMUST00000217659 337 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Gm23247-201ENSMUST00000083373 107 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Mir322-201ENSMUST00000083484 95 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.02□□□□□ -2.09
Rpa3Q9CQ71 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Rpa3Q9CQ71 Gm14600-201ENSMUST00000121032 630 ntBASIC2.01□□□□□ -2.09
Rpa3Q9CQ71 Gm11438-201ENSMUST00000121582 189 ntBASIC2.01□□□□□ -2.09
Rpa3Q9CQ71 Gm13406-201ENSMUST00000121991 256 ntBASIC2.01□□□□□ -2.09
Rpa3Q9CQ71 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.01□□□□□ -2.09
Rpa3Q9CQ71 Gm26275-201ENSMUST00000157101 268 ntBASIC2.01□□□□□ -2.09
Rpa3Q9CQ71 Gm22264-201ENSMUST00000178200 107 ntBASIC2.01□□□□□ -2.09
Rpa3Q9CQ71 Mir6950-201ENSMUST00000184438 73 ntBASIC2.01□□□□□ -2.09
Rpa3Q9CQ71 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.01□□□□□ -2.09
Rpa3Q9CQ71 Gm43659-201ENSMUST00000200894 628 ntBASIC2.01□□□□□ -2.09
Rpa3Q9CQ71 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.01□□□□□ -2.09
Rpa3Q9CQ71 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.01□□□□□ -2.09
Rpa3Q9CQ71 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Rpa3Q9CQ71 CT009764.1-201ENSMUST00000222260 483 ntBASIC2.01□□□□□ -2.09
Rpa3Q9CQ71 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.01□□□□□ -2.09
Rpa3Q9CQ71 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.01□□□□□ -2.09
Rpa3Q9CQ71 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Rpa3Q9CQ71 Gm24984-201ENSMUST00000104454 133 ntBASIC2□□□□□ -2.09
Rpa3Q9CQ71 Gm15029-201ENSMUST00000119742 199 ntBASIC2□□□□□ -2.09
Rpa3Q9CQ71 Gm22483-201ENSMUST00000157986 274 ntBASIC2□□□□□ -2.09
Rpa3Q9CQ71 Gm16584-201ENSMUST00000159267 189 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms