Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm26177-201ENSMUST00000178683 107 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm28356-202ENSMUST00000187566 858 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm20885-201ENSMUST00000190192 654 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm37557-201ENSMUST00000191640 139 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm33571-201ENSMUST00000193271 657 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm36866-201ENSMUST00000193343 657 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm36047-201ENSMUST00000193659 657 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm20857-201ENSMUST00000194766 657 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm20858-201ENSMUST00000195459 657 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm45791-201ENSMUST00000212908 352 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 AC131085.1-201ENSMUST00000224746 656 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm26437-201ENSMUST00000082595 105 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm16261-201ENSMUST00000096813 205 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Use1Q9CQ56 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 Mir467h-201ENSMUST00000116759 121 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 Gm13862-201ENSMUST00000121220 197 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 Gm26256-201ENSMUST00000122499 186 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 Gm24836-201ENSMUST00000122609 108 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 Gm22452-201ENSMUST00000122804 104 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Use1Q9CQ56 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.22□□□□□ -2.05
Use1Q9CQ56 Gm25224-201ENSMUST00000158195 68 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 Gm27753-201ENSMUST00000184742 203 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 Gm19193-201ENSMUST00000190263 590 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 Gm37993-201ENSMUST00000195301 988 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.22□□□□□ -2.05
Use1Q9CQ56 Gm43026-201ENSMUST00000202972 325 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 Gm44988-201ENSMUST00000203835 1161 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 Gm43955-201ENSMUST00000204332 142 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.22□□□□□ -2.05
Use1Q9CQ56 Gm18000-201ENSMUST00000212153 800 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Use1Q9CQ56 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Use1Q9CQ56 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.22□□□□□ -2.05
Use1Q9CQ56 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Use1Q9CQ56 Gm13756-201ENSMUST00000117618 222 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Gm12897-201ENSMUST00000120341 250 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Gm14845-201ENSMUST00000121259 306 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Gm12412-201ENSMUST00000121867 328 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Gm14629-201ENSMUST00000122428 144 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Gm22186-201ENSMUST00000157822 122 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Gm17164-201ENSMUST00000169013 506 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Gm24304-201ENSMUST00000177635 107 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Gm23402-201ENSMUST00000178130 107 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Gm23648-201ENSMUST00000180301 107 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Use1Q9CQ56 Gm37743-201ENSMUST00000194645 376 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Gm43286-201ENSMUST00000197420 424 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Mir3069-201ENSMUST00000198802 65 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Gm5317-201ENSMUST00000204445 847 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.21□□□□□ -2.06
Use1Q9CQ56 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Gm19709-201ENSMUST00000215403 482 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Use1Q9CQ56 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Use1Q9CQ56 Gm23506-201ENSMUST00000083077 107 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Gm22866-201ENSMUST00000083947 177 ntBASIC2.21□□□□□ -2.06
Use1Q9CQ56 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.2□□□□□ -2.06
Use1Q9CQ56 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.2□□□□□ -2.06
Use1Q9CQ56 Gm14652-201ENSMUST00000118479 235 ntBASIC2.2□□□□□ -2.06
Use1Q9CQ56 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Use1Q9CQ56 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Use1Q9CQ56 Gm6395-201ENSMUST00000167639 691 ntBASIC2.2□□□□□ -2.06
Use1Q9CQ56 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2.2□□□□□ -2.06
Use1Q9CQ56 Gm17929-201ENSMUST00000186851 627 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms