Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm23766-201ENSMUST00000103894 80 ntBASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm11813-201ENSMUST00000118586 291 ntBASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm13482-201ENSMUST00000119842 254 ntBASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm14428-201ENSMUST00000120408 822 ntBASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm22853-201ENSMUST00000174974 131 ntBASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm24086-201ENSMUST00000175171 98 ntBASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm23145-201ENSMUST00000178912 79 ntBASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm27470-201ENSMUST00000184070 210 ntBASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm27330-201ENSMUST00000184689 132 ntBASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm29658-201ENSMUST00000185404 230 ntBASIC2.6□□□□□ -1.99
Cstf1Q99LC2 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm9696-202ENSMUST00000191541 830 ntBASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm37866-201ENSMUST00000191950 696 ntBASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm38280-201ENSMUST00000192610 158 ntBASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm44477-201ENSMUST00000199661 110 ntBASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm43810-201ENSMUST00000201018 232 ntBASIC2.6□□□□□ -1.99
Cstf1Q99LC2 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Cstf1Q99LC2 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Cstf1Q99LC2 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Cstf1Q99LC2 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.6□□□□□ -1.99
Cstf1Q99LC2 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Cstf1Q99LC2 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Cstf1Q99LC2 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Gm13085-201ENSMUST00000118356 171 ntBASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Gm11784-201ENSMUST00000118568 474 ntBASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Gm14292-201ENSMUST00000118761 456 ntBASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Gm23118-201ENSMUST00000122657 187 ntBASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Gm22452-201ENSMUST00000122804 104 ntBASIC2.59□□□□□ -1.99
Cstf1Q99LC2 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Gm26275-201ENSMUST00000157101 268 ntBASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Mir3964-201ENSMUST00000174898 74 ntBASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Gm24082-201ENSMUST00000175175 83 ntBASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Gm29817-201ENSMUST00000210098 172 ntBASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Gm45879-201ENSMUST00000212521 392 ntBASIC2.59□□□□□ -1.99
Cstf1Q99LC2 AC162934.3-201ENSMUST00000223015 841 ntBASIC2.59□□□□□ -1.99
Cstf1Q99LC2 CT009550.5-201ENSMUST00000226286 382 ntBASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Gm7984-201ENSMUST00000060640 538 ntBASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.59□□□□□ -1.99
Cstf1Q99LC2 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Cstf1Q99LC2 Gm43896-201ENSMUST00000203440 2032 ntBASIC2.59□□□□□ -2
Cstf1Q99LC2 AC162910.1-201ENSMUST00000221219 1723 ntBASIC2.59□□□□□ -2
Cstf1Q99LC2 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cstf1Q99LC2 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cstf1Q99LC2 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.58□□□□□ -2
Cstf1Q99LC2 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm24430-201ENSMUST00000104077 104 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm14867-201ENSMUST00000120156 866 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm23230-201ENSMUST00000157298 133 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm23538-201ENSMUST00000157535 101 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm23409-201ENSMUST00000158516 237 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Cstf1Q99LC2 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm21894-201ENSMUST00000179631 546 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm24137-201ENSMUST00000180055 79 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm22391-201ENSMUST00000180356 79 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.58□□□□□ -2
Cstf1Q99LC2 Mir6382-201ENSMUST00000184055 110 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm8676-201ENSMUST00000184206 637 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm37807-201ENSMUST00000194310 190 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm45288-201ENSMUST00000210236 151 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 AC162931.1-201ENSMUST00000214184 267 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.58□□□□□ -2
Cstf1Q99LC2 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cstf1Q99LC2 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Cstf1Q99LC2 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm26458-201ENSMUST00000082832 128 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm23723-201ENSMUST00000082996 132 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm23645-201ENSMUST00000083228 108 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm23847-201ENSMUST00000083829 110 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.58□□□□□ -2
Cstf1Q99LC2 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 113.3 ms