Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Gm11065-201ENSMUST00000111462 228 ntBASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Gm24594-201ENSMUST00000122502 99 ntBASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Mir1942-201ENSMUST00000157274 63 ntBASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Gm25664-201ENSMUST00000157697 107 ntBASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Gm26983-201ENSMUST00000182051 388 ntBASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Gm28453-203ENSMUST00000187041 189 ntBASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Gm44389-201ENSMUST00000203795 182 ntBASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Gm5175-202ENSMUST00000219699 529 ntBASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Gm24152-201ENSMUST00000082764 163 ntBASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Mir202-201ENSMUST00000083568 72 ntBASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Rpa1Q8VEE4 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Gm14894-201ENSMUST00000117170 270 ntBASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Gm14586-201ENSMUST00000119571 408 ntBASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Gm13435-201ENSMUST00000120111 1023 ntBASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Gm13210-201ENSMUST00000121483 273 ntBASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Gm15065-201ENSMUST00000121699 273 ntBASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Gm22027-201ENSMUST00000122737 127 ntBASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Gm26275-201ENSMUST00000157101 268 ntBASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Gm25654-201ENSMUST00000158467 88 ntBASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Mir6343-201ENSMUST00000183584 84 ntBASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Gm27718-201ENSMUST00000183721 86 ntBASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Gm28097-201ENSMUST00000187333 366 ntBASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Gm37449-201ENSMUST00000193016 270 ntBASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Gm18658-201ENSMUST00000195558 270 ntBASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Gm43724-201ENSMUST00000197516 226 ntBASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Gm9616-201ENSMUST00000221154 781 ntBASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 AC123533.1-201ENSMUST00000227782 446 ntBASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 AC129017.1-201ENSMUST00000228363 270 ntBASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Rpa1Q8VEE4 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Gm22784-201ENSMUST00000104088 132 ntBASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Mir1188-201ENSMUST00000116756 120 ntBASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Gm15926-201ENSMUST00000120492 550 ntBASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Gm11894-201ENSMUST00000121579 328 ntBASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Gm28000-201ENSMUST00000184380 85 ntBASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Gm37636-201ENSMUST00000193583 359 ntBASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Gm40810-201ENSMUST00000219149 253 ntBASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Gm23514-201ENSMUST00000082827 130 ntBASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Gm22294-201ENSMUST00000083308 104 ntBASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Mir471-201ENSMUST00000093596 67 ntBASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 AC117226.1-201ENSMUST00000221635 3737 ntBASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Rpa1Q8VEE4 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
Rpa1Q8VEE4 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Rpa1Q8VEE4 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Rpa1Q8VEE4 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Rpa1Q8VEE4 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Rpa1Q8VEE4 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
Rpa1Q8VEE4 Gm6897-201ENSMUST00000117714 138 ntBASIC4.55□□□□□ -1.68
Rpa1Q8VEE4 Gm14758-201ENSMUST00000119104 138 ntBASIC4.55□□□□□ -1.68
Rpa1Q8VEE4 Gm22957-201ENSMUST00000122511 123 ntBASIC4.55□□□□□ -1.68
Rpa1Q8VEE4 Gm16345-201ENSMUST00000146065 158 ntBASIC4.55□□□□□ -1.68
Rpa1Q8VEE4 Gm25390-201ENSMUST00000157341 103 ntBASIC4.55□□□□□ -1.68
Rpa1Q8VEE4 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.55□□□□□ -1.68
Rpa1Q8VEE4 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.55□□□□□ -1.68
Rpa1Q8VEE4 Gm38238-201ENSMUST00000194334 346 ntBASIC4.55□□□□□ -1.68
Rpa1Q8VEE4 Gm8069-201ENSMUST00000197887 154 ntBASIC4.55□□□□□ -1.68
Rpa1Q8VEE4 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms