Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm23137-201ENSMUST00000157559 107 ntBASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 Mir5129-201ENSMUST00000174938 78 ntBASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 Gm24572-201ENSMUST00000175505 88 ntBASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 Mir6541-201ENSMUST00000183649 110 ntBASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 Mir6995-201ENSMUST00000183658 71 ntBASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 Gm37533-201ENSMUST00000193848 545 ntBASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 Platr25-208ENSMUST00000222602 939 ntBASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 Gm25130-201ENSMUST00000082650 156 ntBASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.91□□□□□ -2.1
Ccdc28aQ8CEI3 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
Ccdc28aQ8CEI3 Gm44708-201ENSMUST00000205580 2237 ntBASIC1.9□□□□□ -2.1
Ccdc28aQ8CEI3 Gm14670-201ENSMUST00000117327 337 ntBASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 Gm12941-201ENSMUST00000117934 220 ntBASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 Gm11935-201ENSMUST00000118608 399 ntBASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 Gm15381-201ENSMUST00000121501 1156 ntBASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 Gm13555-201ENSMUST00000121668 319 ntBASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 Gm28627-201ENSMUST00000186141 453 ntBASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 Gm37550-201ENSMUST00000193230 463 ntBASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 Gm44058-201ENSMUST00000204335 467 ntBASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 Gm43865-201ENSMUST00000204721 127 ntBASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 AC152979.4-201ENSMUST00000219893 379 ntBASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 AL645546.2-201ENSMUST00000224526 265 ntBASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 AC133654.1-201ENSMUST00000228411 672 ntBASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 Gm25126-201ENSMUST00000083343 102 ntBASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.9□□□□□ -2.11
Ccdc28aQ8CEI3 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 Mir344e-201ENSMUST00000104677 66 ntBASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 Gm25529-201ENSMUST00000104850 92 ntBASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 Gm12889-201ENSMUST00000118684 241 ntBASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 Gm14292-201ENSMUST00000118761 456 ntBASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 Gm12926-201ENSMUST00000121158 409 ntBASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 Gm25961-201ENSMUST00000157174 135 ntBASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 Gm23933-201ENSMUST00000178405 79 ntBASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 Mir7047-201ENSMUST00000184595 64 ntBASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 Gm38281-201ENSMUST00000192301 315 ntBASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 Gm42924-201ENSMUST00000197261 185 ntBASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 Gm18410-201ENSMUST00000207199 577 ntBASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 CT009764.1-201ENSMUST00000222260 483 ntBASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 CT571256.1-201ENSMUST00000226045 585 ntBASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ccdc28aQ8CEI3 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm24907-201ENSMUST00000116932 128 ntBASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm15193-201ENSMUST00000120224 865 ntBASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm12607-201ENSMUST00000120724 493 ntBASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm13406-201ENSMUST00000121991 256 ntBASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm9071-201ENSMUST00000165915 474 ntBASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm38075-201ENSMUST00000191979 920 ntBASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm37684-201ENSMUST00000192779 355 ntBASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm44212-201ENSMUST00000205016 897 ntBASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm30738-201ENSMUST00000221346 502 ntBASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm18338-201ENSMUST00000222381 560 ntBASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm25799-201ENSMUST00000082643 107 ntBASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Gm10780-201ENSMUST00000099459 285 ntBASIC1.88□□□□□ -2.11
Ccdc28aQ8CEI3 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Ccdc28aQ8CEI3 Gm5596-201ENSMUST00000207988 2421 ntBASIC1.87□□□□□ -2.11
Ccdc28aQ8CEI3 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Ccdc28aQ8CEI3 Anp32-ps-201ENSMUST00000118265 388 ntBASIC1.87□□□□□ -2.11
Ccdc28aQ8CEI3 Gm9043-201ENSMUST00000119677 314 ntBASIC1.87□□□□□ -2.11
Ccdc28aQ8CEI3 Gm5646-201ENSMUST00000120568 714 ntBASIC1.87□□□□□ -2.11
Ccdc28aQ8CEI3 Gm15986-201ENSMUST00000122153 400 ntBASIC1.87□□□□□ -2.11
Ccdc28aQ8CEI3 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC1.87□□□□□ -2.11
Ccdc28aQ8CEI3 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Ccdc28aQ8CEI3 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC1.87□□□□□ -2.11
Ccdc28aQ8CEI3 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
Ccdc28aQ8CEI3 Gm44634-201ENSMUST00000206119 152 ntBASIC1.87□□□□□ -2.11
Ccdc28aQ8CEI3 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC1.87□□□□□ -2.11
Ccdc28aQ8CEI3 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 103.3 ms