Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm25707-201ENSMUST00000175120 96 ntBASIC1.91□□□□□ -2.1
Trub1Q8C0D0 Gm23813-201ENSMUST00000175153 77 ntBASIC1.91□□□□□ -2.1
Trub1Q8C0D0 Gm8532-201ENSMUST00000179174 461 ntBASIC1.91□□□□□ -2.1
Trub1Q8C0D0 Gm7329-201ENSMUST00000185915 210 ntBASIC1.91□□□□□ -2.1
Trub1Q8C0D0 Gm37732-201ENSMUST00000194377 316 ntBASIC1.91□□□□□ -2.1
Trub1Q8C0D0 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Trub1Q8C0D0 AC154552.5-201ENSMUST00000222352 207 ntBASIC1.91□□□□□ -2.1
Trub1Q8C0D0 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Trub1Q8C0D0 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
Trub1Q8C0D0 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
Trub1Q8C0D0 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
Trub1Q8C0D0 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC1.9□□□□□ -2.11
Trub1Q8C0D0 Gm7429-201ENSMUST00000118664 348 ntBASIC1.9□□□□□ -2.11
Trub1Q8C0D0 Gm14292-201ENSMUST00000118761 456 ntBASIC1.9□□□□□ -2.11
Trub1Q8C0D0 Gm14669-201ENSMUST00000118841 250 ntBASIC1.9□□□□□ -2.11
Trub1Q8C0D0 Gm5287-201ENSMUST00000120666 598 ntBASIC1.9□□□□□ -2.11
Trub1Q8C0D0 Gm14363-201ENSMUST00000122304 409 ntBASIC1.9□□□□□ -2.11
Trub1Q8C0D0 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Trub1Q8C0D0 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Trub1Q8C0D0 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.9□□□□□ -2.11
Trub1Q8C0D0 Gm29192-201ENSMUST00000190942 377 ntBASIC1.9□□□□□ -2.11
Trub1Q8C0D0 Gm37557-201ENSMUST00000191640 139 ntBASIC1.9□□□□□ -2.11
Trub1Q8C0D0 Trbv6-201ENSMUST00000193743 276 ntBASIC1.9□□□□□ -2.11
Trub1Q8C0D0 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.9□□□□□ -2.11
Trub1Q8C0D0 Gm43228-201ENSMUST00000200735 264 ntBASIC1.9□□□□□ -2.11
Trub1Q8C0D0 Gm45344-201ENSMUST00000211610 341 ntBASIC1.9□□□□□ -2.11
Trub1Q8C0D0 AC157017.2-201ENSMUST00000218354 777 ntBASIC1.9□□□□□ -2.11
Trub1Q8C0D0 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Trub1Q8C0D0 Mir322-201ENSMUST00000083484 95 ntBASIC1.9□□□□□ -2.11
Trub1Q8C0D0 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
Trub1Q8C0D0 Gm24984-201ENSMUST00000104454 133 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm649-201ENSMUST00000117284 1054 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm11490-201ENSMUST00000118128 272 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm13085-201ENSMUST00000118356 171 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm22764-201ENSMUST00000158370 92 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm24770-201ENSMUST00000158505 92 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm24080-201ENSMUST00000175178 232 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm24656-201ENSMUST00000177548 132 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Mir6541-201ENSMUST00000183649 110 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Mir6371-201ENSMUST00000184470 111 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm28163-201ENSMUST00000187099 325 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm37692-201ENSMUST00000192633 232 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm43901-201ENSMUST00000203247 453 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm44295-201ENSMUST00000203805 437 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC1.89□□□□□ -2.11
Trub1Q8C0D0 AC172027.1-201ENSMUST00000217659 337 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 AC167202.1-201ENSMUST00000219027 331 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm18338-201ENSMUST00000222381 560 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC1.89□□□□□ -2.11
Trub1Q8C0D0 AL645546.2-201ENSMUST00000224526 265 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm22866-201ENSMUST00000083947 177 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm10780-201ENSMUST00000099459 285 ntBASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trub1Q8C0D0 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Gm14894-201ENSMUST00000117170 270 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Anp32-ps-201ENSMUST00000118265 388 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Gm11935-201ENSMUST00000118608 399 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 n-R5s216-201ENSMUST00000122755 112 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Mup-ps4-201ENSMUST00000151005 539 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Gm25051-201ENSMUST00000158602 249 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Gm23704-201ENSMUST00000158844 340 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Mir6995-201ENSMUST00000183658 71 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Gm29516-201ENSMUST00000190402 468 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Gm37449-201ENSMUST00000193016 270 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Gm18658-201ENSMUST00000195558 270 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Gm44181-201ENSMUST00000203106 483 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Gm45791-201ENSMUST00000212908 352 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 AC154552.4-201ENSMUST00000222171 151 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Gm22683-201ENSMUST00000082854 137 ntBASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trub1Q8C0D0 Defa-ps1-201ENSMUST00000119062 282 ntBASIC1.87□□□□□ -2.11
Trub1Q8C0D0 Gm12935-201ENSMUST00000119352 246 ntBASIC1.87□□□□□ -2.11
Trub1Q8C0D0 Gm15381-201ENSMUST00000121501 1156 ntBASIC1.87□□□□□ -2.11
Trub1Q8C0D0 Defa-ps6-201ENSMUST00000122172 282 ntBASIC1.87□□□□□ -2.11
Trub1Q8C0D0 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Trub1Q8C0D0 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Trub1Q8C0D0 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC1.87□□□□□ -2.11
Trub1Q8C0D0 Gm25981-201ENSMUST00000157921 295 ntBASIC1.87□□□□□ -2.11
Trub1Q8C0D0 Gm22666-201ENSMUST00000158717 164 ntBASIC1.87□□□□□ -2.11
Trub1Q8C0D0 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 118.9 ms