Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Mir208b-201ENSMUST00000104735 77 ntBASIC2.28□□□□□ -2.04
Usp47Q8BY87 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Usp47Q8BY87 Gm11252-201ENSMUST00000120572 939 ntBASIC2.28□□□□□ -2.04
Usp47Q8BY87 Gm15115-201ENSMUST00000121145 264 ntBASIC2.28□□□□□ -2.04
Usp47Q8BY87 Gm2878-201ENSMUST00000170173 486 ntBASIC2.28□□□□□ -2.04
Usp47Q8BY87 Gm37455-201ENSMUST00000191993 529 ntBASIC2.28□□□□□ -2.04
Usp47Q8BY87 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.28□□□□□ -2.04
Usp47Q8BY87 Gm37098-201ENSMUST00000192290 244 ntBASIC2.28□□□□□ -2.04
Usp47Q8BY87 Gm37119-201ENSMUST00000195691 389 ntBASIC2.28□□□□□ -2.04
Usp47Q8BY87 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Usp47Q8BY87 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.28□□□□□ -2.04
Usp47Q8BY87 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.28□□□□□ -2.04
Usp47Q8BY87 Gm5583-201ENSMUST00000174328 1519 ntBASIC2.28□□□□□ -2.04
Usp47Q8BY87 Gm6913-201ENSMUST00000100019 348 ntBASIC2.27□□□□□ -2.05
Usp47Q8BY87 Gm15714-201ENSMUST00000117168 250 ntBASIC2.27□□□□□ -2.05
Usp47Q8BY87 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.27□□□□□ -2.05
Usp47Q8BY87 Gm22957-201ENSMUST00000122511 123 ntBASIC2.27□□□□□ -2.05
Usp47Q8BY87 Gm24902-201ENSMUST00000158126 123 ntBASIC2.27□□□□□ -2.05
Usp47Q8BY87 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.27□□□□□ -2.05
Usp47Q8BY87 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.27□□□□□ -2.05
Usp47Q8BY87 Gm28196-201ENSMUST00000187719 640 ntBASIC2.27□□□□□ -2.05
Usp47Q8BY87 Gm20915-201ENSMUST00000191575 663 ntBASIC2.27□□□□□ -2.05
Usp47Q8BY87 Gm18551-201ENSMUST00000195594 642 ntBASIC2.27□□□□□ -2.05
Usp47Q8BY87 Gm44849-201ENSMUST00000207595 484 ntBASIC2.27□□□□□ -2.05
Usp47Q8BY87 Gm25402-201ENSMUST00000082966 131 ntBASIC2.27□□□□□ -2.05
Usp47Q8BY87 Mir30d-201ENSMUST00000083503 82 ntBASIC2.27□□□□□ -2.05
Usp47Q8BY87 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Usp47Q8BY87 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Usp47Q8BY87 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Usp47Q8BY87 Gm14069-201ENSMUST00000120815 229 ntBASIC2.26□□□□□ -2.05
Usp47Q8BY87 Gm12591-201ENSMUST00000122407 1177 ntBASIC2.26□□□□□ -2.05
Usp47Q8BY87 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.26□□□□□ -2.05
Usp47Q8BY87 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.26□□□□□ -2.05
Usp47Q8BY87 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.26□□□□□ -2.05
Usp47Q8BY87 Gm6060-201ENSMUST00000188671 251 ntBASIC2.26□□□□□ -2.05
Usp47Q8BY87 Gm19123-201ENSMUST00000190716 651 ntBASIC2.26□□□□□ -2.05
Usp47Q8BY87 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC2.26□□□□□ -2.05
Usp47Q8BY87 Gm43096-201ENSMUST00000196173 421 ntBASIC2.26□□□□□ -2.05
Usp47Q8BY87 Gm45146-201ENSMUST00000207108 221 ntBASIC2.26□□□□□ -2.05
Usp47Q8BY87 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.26□□□□□ -2.05
Usp47Q8BY87 Gm46993-201ENSMUST00000220708 259 ntBASIC2.26□□□□□ -2.05
Usp47Q8BY87 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.26□□□□□ -2.05
Usp47Q8BY87 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.26□□□□□ -2.05
Usp47Q8BY87 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.26□□□□□ -2.05
Usp47Q8BY87 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Usp47Q8BY87 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.25□□□□□ -2.05
Usp47Q8BY87 Gm22665-201ENSMUST00000158720 275 ntBASIC2.25□□□□□ -2.05
Usp47Q8BY87 Gm17186-201ENSMUST00000171742 456 ntBASIC2.25□□□□□ -2.05
Usp47Q8BY87 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.25□□□□□ -2.05
Usp47Q8BY87 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Usp47Q8BY87 Gm44487-201ENSMUST00000205145 325 ntBASIC2.25□□□□□ -2.05
Usp47Q8BY87 Gm4921-201ENSMUST00000219804 992 ntBASIC2.25□□□□□ -2.05
Usp47Q8BY87 AC121960.3-201ENSMUST00000227077 623 ntBASIC2.25□□□□□ -2.05
Usp47Q8BY87 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Usp47Q8BY87 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Usp47Q8BY87 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Usp47Q8BY87 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Usp47Q8BY87 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.25□□□□□ -2.05
Usp47Q8BY87 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Usp47Q8BY87 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Usp47Q8BY87 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Usp47Q8BY87 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Usp47Q8BY87 Gm26487-201ENSMUST00000158022 94 ntBASIC2.24□□□□□ -2.05
Usp47Q8BY87 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Usp47Q8BY87 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Usp47Q8BY87 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC2.24□□□□□ -2.05
Usp47Q8BY87 Mir7039-201ENSMUST00000183852 85 ntBASIC2.24□□□□□ -2.05
Usp47Q8BY87 Gm17937-201ENSMUST00000197908 742 ntBASIC2.24□□□□□ -2.05
Usp47Q8BY87 Gm43911-201ENSMUST00000203097 76 ntBASIC2.24□□□□□ -2.05
Usp47Q8BY87 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC2.24□□□□□ -2.05
Usp47Q8BY87 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC2.24□□□□□ -2.05
Usp47Q8BY87 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC2.24□□□□□ -2.05
Usp47Q8BY87 AC133176.1-201ENSMUST00000226668 219 ntBASIC2.24□□□□□ -2.05
Usp47Q8BY87 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.24□□□□□ -2.05
Usp47Q8BY87 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Usp47Q8BY87 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm13046-201ENSMUST00000117391 501 ntBASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm14677-201ENSMUST00000117866 486 ntBASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm13424-201ENSMUST00000122301 354 ntBASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm16289-201ENSMUST00000162079 183 ntBASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm17064-201ENSMUST00000167690 452 ntBASIC2.23□□□□□ -2.05
Usp47Q8BY87 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm22252-201ENSMUST00000179316 79 ntBASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm27522-201ENSMUST00000183949 230 ntBASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm44332-201ENSMUST00000203712 433 ntBASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm45023-201ENSMUST00000207951 379 ntBASIC2.23□□□□□ -2.05
Usp47Q8BY87 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.23□□□□□ -2.05
Usp47Q8BY87 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Usp47Q8BY87 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm15526-201ENSMUST00000112504 204 ntBASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm5937-201ENSMUST00000119715 643 ntBASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm22776-201ENSMUST00000178634 94 ntBASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm23767-201ENSMUST00000179278 94 ntBASIC2.23□□□□□ -2.05
Usp47Q8BY87 Gm26701-201ENSMUST00000181571 234 ntBASIC2.23□□□□□ -2.05
Usp47Q8BY87 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms