Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Trerf1Q8BXJ2 Gm37698-201ENSMUST00000192605 463 ntBASIC3.7□□□□□ -1.82
Trerf1Q8BXJ2 Gm43624-201ENSMUST00000197368 180 ntBASIC3.7□□□□□ -1.82
Trerf1Q8BXJ2 Gm29818-201ENSMUST00000218070 165 ntBASIC3.7□□□□□ -1.82
Trerf1Q8BXJ2 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.7□□□□□ -1.82
Trerf1Q8BXJ2 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trerf1Q8BXJ2 Gm24950-201ENSMUST00000082768 191 ntBASIC3.7□□□□□ -1.82
Trerf1Q8BXJ2 Gm23971-201ENSMUST00000083317 191 ntBASIC3.7□□□□□ -1.82
Trerf1Q8BXJ2 Gm23650-201ENSMUST00000083355 70 ntBASIC3.7□□□□□ -1.82
Trerf1Q8BXJ2 Gm23849-201ENSMUST00000083833 191 ntBASIC3.7□□□□□ -1.82
Trerf1Q8BXJ2 Gm26316-201ENSMUST00000083886 191 ntBASIC3.7□□□□□ -1.82
Trerf1Q8BXJ2 Snord15a-201ENSMUST00000083888 148 ntBASIC3.7□□□□□ -1.82
Trerf1Q8BXJ2 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.7□□□□□ -1.82
Trerf1Q8BXJ2 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trerf1Q8BXJ2 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Trerf1Q8BXJ2 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm15026-201ENSMUST00000119219 458 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm22479-201ENSMUST00000122566 81 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm22310-201ENSMUST00000157509 116 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm22675-201ENSMUST00000158430 104 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm23016-201ENSMUST00000158431 62 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm26195-201ENSMUST00000175035 101 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm20794-201ENSMUST00000177626 628 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm27385-201ENSMUST00000184747 104 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm28506-201ENSMUST00000189937 150 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm29330-201ENSMUST00000190032 699 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm44373-201ENSMUST00000196112 169 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm44294-201ENSMUST00000205090 728 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm44927-201ENSMUST00000207573 716 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm35857-201ENSMUST00000212739 178 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm23404-201ENSMUST00000082543 97 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm23736-201ENSMUST00000082553 75 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm25480-201ENSMUST00000083217 133 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm26263-201ENSMUST00000083281 164 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Gm15084-201ENSMUST00000178585 1502 ntBASIC3.69□□□□□ -1.82
Trerf1Q8BXJ2 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Mir693-201ENSMUST00000102187 89 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Gm24275-201ENSMUST00000116780 146 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 AA413626-201ENSMUST00000121125 494 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Gm13409-201ENSMUST00000122072 546 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Gm23123-201ENSMUST00000157648 144 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Gm24727-201ENSMUST00000158231 144 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Gm22136-201ENSMUST00000158751 268 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Gm19637-201ENSMUST00000185933 579 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Gm19147-201ENSMUST00000199622 652 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Gm45101-201ENSMUST00000208327 232 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Gm45245-201ENSMUST00000210082 376 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.68□□□□□ -1.82
Trerf1Q8BXJ2 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Gm26396-201ENSMUST00000104093 132 ntBASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Gm25727-201ENSMUST00000104522 131 ntBASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Gm22320-201ENSMUST00000157149 312 ntBASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Gm25967-201ENSMUST00000157168 147 ntBASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Gm23602-201ENSMUST00000157258 132 ntBASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Gm24810-201ENSMUST00000175317 70 ntBASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Gm25748-201ENSMUST00000175487 70 ntBASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Gm37455-201ENSMUST00000191993 529 ntBASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Gm37616-201ENSMUST00000193974 322 ntBASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Gm44468-201ENSMUST00000199516 105 ntBASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Gm43083-201ENSMUST00000199594 476 ntBASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Gm44513-201ENSMUST00000206811 439 ntBASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Gm5175-202ENSMUST00000219699 529 ntBASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.67□□□□□ -1.82
Trerf1Q8BXJ2 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms