Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Suds3Q8BR65 Gm5709-201ENSMUST00000177879 1165 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Mir6338-201ENSMUST00000183389 109 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Gm18448-201ENSMUST00000186286 599 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.55□□□□□ -2
Suds3Q8BR65 Gm7837-201ENSMUST00000190873 412 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Gm29192-201ENSMUST00000190942 377 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.55□□□□□ -2
Suds3Q8BR65 Gm37449-201ENSMUST00000193016 270 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Gm37353-201ENSMUST00000194497 313 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Gm18658-201ENSMUST00000195558 270 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Gm42924-201ENSMUST00000197261 185 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Gm43264-201ENSMUST00000202284 325 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Gm44125-201ENSMUST00000203068 448 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Gm44050-201ENSMUST00000204263 527 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.55□□□□□ -2
Suds3Q8BR65 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.55□□□□□ -2
Suds3Q8BR65 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.55□□□□□ -2
Suds3Q8BR65 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Gm25796-201ENSMUST00000082645 163 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Gm24610-201ENSMUST00000083270 109 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Suds3Q8BR65 Gm23516-201ENSMUST00000093728 107 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Suds3Q8BR65 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.55□□□□□ -2
Suds3Q8BR65 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Suds3Q8BR65 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.54□□□□□ -2
Suds3Q8BR65 Gm14007-201ENSMUST00000118288 210 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 Gm15177-201ENSMUST00000120491 577 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 Gm14411-201ENSMUST00000121798 914 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.54□□□□□ -2
Suds3Q8BR65 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.54□□□□□ -2
Suds3Q8BR65 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.54□□□□□ -2
Suds3Q8BR65 Gm23980-201ENSMUST00000157135 158 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 Gm23600-201ENSMUST00000157260 71 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 Gm22765-201ENSMUST00000158371 128 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.54□□□□□ -2
Suds3Q8BR65 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 Gm2930-201ENSMUST00000170403 474 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 Gm21894-201ENSMUST00000179631 546 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC2.54□□□□□ -2
Suds3Q8BR65 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC2.54□□□□□ -2
Suds3Q8BR65 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Suds3Q8BR65 Gm29516-201ENSMUST00000190402 468 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 Gm37599-201ENSMUST00000193067 489 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 Gm19649-201ENSMUST00000201126 822 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC2.54□□□□□ -2
Suds3Q8BR65 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.54□□□□□ -2
Suds3Q8BR65 Gm18488-201ENSMUST00000215082 364 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 CT009550.5-201ENSMUST00000226286 382 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.54□□□□□ -2
Suds3Q8BR65 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
Suds3Q8BR65 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.54□□□□□ -2
Suds3Q8BR65 Gm16261-201ENSMUST00000096813 205 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Suds3Q8BR65 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Suds3Q8BR65 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.54□□□□□ -2
Suds3Q8BR65 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Suds3Q8BR65 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Suds3Q8BR65 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Suds3Q8BR65 Gm24126-201ENSMUST00000104111 106 ntBASIC2.53□□□□□ -2
Suds3Q8BR65 Gm12386-201ENSMUST00000117380 688 ntBASIC2.53□□□□□ -2
Suds3Q8BR65 Gm13085-201ENSMUST00000118356 171 ntBASIC2.53□□□□□ -2
Suds3Q8BR65 Gm11943-201ENSMUST00000119473 327 ntBASIC2.53□□□□□ -2
Suds3Q8BR65 Gm14815-201ENSMUST00000120060 488 ntBASIC2.53□□□□□ -2
Suds3Q8BR65 Gm22755-201ENSMUST00000157143 100 ntBASIC2.53□□□□□ -2
Suds3Q8BR65 Gm18358-201ENSMUST00000173179 1277 ntBASIC2.53□□□□□ -2
Suds3Q8BR65 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.53□□□□□ -2
Suds3Q8BR65 Mir6363-201ENSMUST00000184880 114 ntBASIC2.53□□□□□ -2
Suds3Q8BR65 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.53□□□□□ -2
Suds3Q8BR65 Gm6615-201ENSMUST00000199426 631 ntBASIC2.53□□□□□ -2
Suds3Q8BR65 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.53□□□□□ -2
Suds3Q8BR65 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.53□□□□□ -2
Suds3Q8BR65 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC2.53□□□□□ -2
Suds3Q8BR65 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.53□□□□□ -2
Suds3Q8BR65 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.53□□□□□ -2
Suds3Q8BR65 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.53□□□□□ -2
Suds3Q8BR65 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.53□□□□□ -2
Suds3Q8BR65 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.52□□□□□ -2.01
Suds3Q8BR65 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Suds3Q8BR65 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Suds3Q8BR65 Gm22782-201ENSMUST00000104082 132 ntBASIC2.52□□□□□ -2.01
Suds3Q8BR65 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Suds3Q8BR65 Gm23324-201ENSMUST00000157421 131 ntBASIC2.52□□□□□ -2.01
Suds3Q8BR65 Gm15900-201ENSMUST00000161584 342 ntBASIC2.52□□□□□ -2.01
Suds3Q8BR65 Gm16232-201ENSMUST00000162856 167 ntBASIC2.52□□□□□ -2.01
Suds3Q8BR65 Gm17119-201ENSMUST00000163943 280 ntBASIC2.52□□□□□ -2.01
Suds3Q8BR65 Gm20698-201ENSMUST00000175657 233 ntBASIC2.52□□□□□ -2.01
Suds3Q8BR65 Gm27659-201ENSMUST00000183472 98 ntBASIC2.52□□□□□ -2.01
Suds3Q8BR65 Mir6371-201ENSMUST00000184470 111 ntBASIC2.52□□□□□ -2.01
Suds3Q8BR65 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Suds3Q8BR65 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms