Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm9498-201ENSMUST00000140849 291 ntBASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 Mir6382-201ENSMUST00000184055 110 ntBASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 AC159476.2-201ENSMUST00000216221 418 ntBASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 AC141642.1-201ENSMUST00000220598 229 ntBASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 Gm19118-201ENSMUST00000222554 98 ntBASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 AC154252.1-201ENSMUST00000226041 473 ntBASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 Gm23727-201ENSMUST00000083352 164 ntBASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 Mir423-201ENSMUST00000083584 109 ntBASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Ccdc40Q8BI79 Gm25317-201ENSMUST00000116824 129 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm22151-201ENSMUST00000116963 58 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm14428-201ENSMUST00000120408 822 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm8880-201ENSMUST00000121800 454 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm25220-201ENSMUST00000157546 95 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm26215-201ENSMUST00000158584 139 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm8292-201ENSMUST00000162574 396 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm20794-201ENSMUST00000177626 628 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm28356-202ENSMUST00000187566 858 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm20885-201ENSMUST00000190192 654 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm36866-201ENSMUST00000193343 657 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm36047-201ENSMUST00000193659 657 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm20857-201ENSMUST00000194766 657 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm20858-201ENSMUST00000195459 657 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm44961-201ENSMUST00000207450 196 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm25257-201ENSMUST00000083907 110 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm650-201ENSMUST00000144428 1551 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.73□□□□□ -1.97
Ccdc40Q8BI79 Gm11221-201ENSMUST00000117230 597 ntBASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 Gm12096-201ENSMUST00000121149 829 ntBASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 Gm16428-201ENSMUST00000121193 723 ntBASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 Gm14629-201ENSMUST00000122428 144 ntBASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 Gm25365-201ENSMUST00000158852 121 ntBASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 Gm17054-201ENSMUST00000169811 259 ntBASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 Gm24082-201ENSMUST00000175175 83 ntBASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 Mir6363-201ENSMUST00000184880 114 ntBASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 Trbv6-201ENSMUST00000193743 276 ntBASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 Gm45101-201ENSMUST00000208327 232 ntBASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 CR974485.1-201ENSMUST00000222408 402 ntBASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 Olfr895-201ENSMUST00000093864 951 ntBASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Ccdc40Q8BI79 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.97
Ccdc40Q8BI79 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.71□□□□□ -1.98
Ccdc40Q8BI79 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Ccdc40Q8BI79 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.71□□□□□ -1.98
Ccdc40Q8BI79 Gm23128-201ENSMUST00000104257 132 ntBASIC2.71□□□□□ -1.98
Ccdc40Q8BI79 Gm15497-201ENSMUST00000119137 551 ntBASIC2.71□□□□□ -1.98
Ccdc40Q8BI79 Gm11321-201ENSMUST00000121257 902 ntBASIC2.71□□□□□ -1.98
Ccdc40Q8BI79 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
Ccdc40Q8BI79 Mir3964-201ENSMUST00000174898 74 ntBASIC2.71□□□□□ -1.98
Ccdc40Q8BI79 Gm20058-201ENSMUST00000186939 284 ntBASIC2.71□□□□□ -1.98
Ccdc40Q8BI79 Gm23128-202ENSMUST00000196578 133 ntBASIC2.71□□□□□ -1.98
Ccdc40Q8BI79 Gm6615-201ENSMUST00000199426 631 ntBASIC2.71□□□□□ -1.98
Ccdc40Q8BI79 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.71□□□□□ -1.98
Ccdc40Q8BI79 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.71□□□□□ -1.98
Ccdc40Q8BI79 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.71□□□□□ -1.98
Ccdc40Q8BI79 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Ccdc40Q8BI79 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Ccdc40Q8BI79 Gm22496-201ENSMUST00000104493 88 ntBASIC2.7□□□□□ -1.98
Ccdc40Q8BI79 Gm12878-201ENSMUST00000118744 332 ntBASIC2.7□□□□□ -1.98
Ccdc40Q8BI79 AA413626-201ENSMUST00000121125 494 ntBASIC2.7□□□□□ -1.98
Ccdc40Q8BI79 Gm13913-201ENSMUST00000121126 260 ntBASIC2.7□□□□□ -1.98
Ccdc40Q8BI79 Gm12412-201ENSMUST00000121867 328 ntBASIC2.7□□□□□ -1.98
Ccdc40Q8BI79 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms