Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Gm44030-201ENSMUST00000204865 432 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Gm22572-201ENSMUST00000082985 105 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Gm22974-201ENSMUST00000083301 103 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 AC154386.1-201ENSMUST00000222753 2871 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Mir291a-201ENSMUST00000104815 82 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Gm15175-201ENSMUST00000117629 132 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Gm13574-201ENSMUST00000120482 394 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Gm14562-201ENSMUST00000129885 543 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Gm25163-201ENSMUST00000158905 104 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Gm8392-201ENSMUST00000185647 835 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Gm21673-201ENSMUST00000186640 436 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Gm10193-201ENSMUST00000188288 231 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Gm21135-201ENSMUST00000189023 436 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Gm44520-201ENSMUST00000205447 802 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 CT010480.5-201ENSMUST00000225026 217 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 AC156790.3-201ENSMUST00000226200 254 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Gm22507-201ENSMUST00000082773 160 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Gm25856-201ENSMUST00000082786 75 ntBASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Hmgb4Q6P8W9 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 AC124426.1-203ENSMUST00000221814 1362 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Gm13368-201ENSMUST00000122443 430 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Gm24240-201ENSMUST00000157785 135 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Gm27532-201ENSMUST00000183726 113 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Gm27505-201ENSMUST00000185071 110 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Gm28628-201ENSMUST00000187006 264 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Gm28629-201ENSMUST00000187309 263 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Gm8242-202ENSMUST00000193056 475 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Gm37771-201ENSMUST00000193121 265 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Gm42164-201ENSMUST00000198881 379 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Gm44041-201ENSMUST00000203678 396 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Gm44472-201ENSMUST00000204922 943 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Gm45772-201ENSMUST00000212961 240 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 AC116589.7-201ENSMUST00000221061 239 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 AC164117.1-201ENSMUST00000221726 239 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 CT010505.1-201ENSMUST00000227026 396 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Gm25411-201ENSMUST00000083760 151 ntBASIC3.04□□□□□ -1.92
Hmgb4Q6P8W9 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Hmgb4Q6P8W9 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Hmgb4Q6P8W9 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.92
Hmgb4Q6P8W9 Gm14918-201ENSMUST00000118153 268 ntBASIC3.03□□□□□ -1.92
Hmgb4Q6P8W9 AA413626-201ENSMUST00000121125 494 ntBASIC3.03□□□□□ -1.92
Hmgb4Q6P8W9 Gm22141-201ENSMUST00000157403 277 ntBASIC3.03□□□□□ -1.92
Hmgb4Q6P8W9 Gm22098-201ENSMUST00000157930 85 ntBASIC3.03□□□□□ -1.92
Hmgb4Q6P8W9 Gm22631-201ENSMUST00000179656 94 ntBASIC3.03□□□□□ -1.92
Hmgb4Q6P8W9 Gm17946-201ENSMUST00000186856 538 ntBASIC3.03□□□□□ -1.92
Hmgb4Q6P8W9 Gm19641-201ENSMUST00000188432 417 ntBASIC3.03□□□□□ -1.92
Hmgb4Q6P8W9 Gm18551-201ENSMUST00000195594 642 ntBASIC3.03□□□□□ -1.92
Hmgb4Q6P8W9 Gm19177-201ENSMUST00000204520 613 ntBASIC3.03□□□□□ -1.92
Hmgb4Q6P8W9 Gm44910-201ENSMUST00000208451 396 ntBASIC3.03□□□□□ -1.92
Hmgb4Q6P8W9 Gm35558-203ENSMUST00000222264 204 ntBASIC3.03□□□□□ -1.92
Hmgb4Q6P8W9 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.03□□□□□ -1.92
Hmgb4Q6P8W9 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Hmgb4Q6P8W9 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.03□□□□□ -1.92
Hmgb4Q6P8W9 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Hmgb4Q6P8W9 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Hmgb4Q6P8W9 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Hmgb4Q6P8W9 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Hmgb4Q6P8W9 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Hmgb4Q6P8W9 Gm11456-201ENSMUST00000121070 256 ntBASIC3.02□□□□□ -1.93
Hmgb4Q6P8W9 Gm11849-201ENSMUST00000121293 261 ntBASIC3.02□□□□□ -1.93
Hmgb4Q6P8W9 Gm14578-201ENSMUST00000122166 391 ntBASIC3.02□□□□□ -1.93
Hmgb4Q6P8W9 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.02□□□□□ -1.93
Hmgb4Q6P8W9 Gm25624-201ENSMUST00000157222 275 ntBASIC3.02□□□□□ -1.93
Hmgb4Q6P8W9 Gm16289-201ENSMUST00000162079 183 ntBASIC3.02□□□□□ -1.93
Hmgb4Q6P8W9 Gm8207-201ENSMUST00000171204 502 ntBASIC3.02□□□□□ -1.93
Hmgb4Q6P8W9 Gm26928-201ENSMUST00000182674 572 ntBASIC3.02□□□□□ -1.93
Hmgb4Q6P8W9 Gm28151-201ENSMUST00000189404 951 ntBASIC3.02□□□□□ -1.93
Hmgb4Q6P8W9 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Hmgb4Q6P8W9 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.02□□□□□ -1.93
Hmgb4Q6P8W9 Gm43393-201ENSMUST00000200147 194 ntBASIC3.02□□□□□ -1.93
Hmgb4Q6P8W9 Gm44157-201ENSMUST00000204720 410 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms