Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm14445-201ENSMUST00000117051 1484 ntBASIC3.31□□□□□ -1.88
Trim27Q62158 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
Trim27Q62158 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim27Q62158 Gm3940-201ENSMUST00000105087 432 ntBASIC3.31□□□□□ -1.88
Trim27Q62158 Gm14793-201ENSMUST00000118739 311 ntBASIC3.31□□□□□ -1.88
Trim27Q62158 Gm8880-201ENSMUST00000121800 454 ntBASIC3.31□□□□□ -1.88
Trim27Q62158 Gm15466-201ENSMUST00000122299 333 ntBASIC3.31□□□□□ -1.88
Trim27Q62158 Gm11358-201ENSMUST00000122310 373 ntBASIC3.31□□□□□ -1.88
Trim27Q62158 Gm22718-201ENSMUST00000122701 315 ntBASIC3.31□□□□□ -1.88
Trim27Q62158 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.31□□□□□ -1.88
Trim27Q62158 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim27Q62158 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.31□□□□□ -1.88
Trim27Q62158 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Trim27Q62158 Gm27786-201ENSMUST00000184337 70 ntBASIC3.31□□□□□ -1.88
Trim27Q62158 Trbv24-201ENSMUST00000194614 347 ntBASIC3.31□□□□□ -1.88
Trim27Q62158 Gm43955-201ENSMUST00000204332 142 ntBASIC3.31□□□□□ -1.88
Trim27Q62158 Gm44526-201ENSMUST00000204664 121 ntBASIC3.31□□□□□ -1.88
Trim27Q62158 AC124542.1-201ENSMUST00000205588 908 ntBASIC3.31□□□□□ -1.88
Trim27Q62158 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim27Q62158 Gm44923-201ENSMUST00000206673 85 ntBASIC3.31□□□□□ -1.88
Trim27Q62158 Gm2628-201ENSMUST00000218019 426 ntBASIC3.31□□□□□ -1.88
Trim27Q62158 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC3.31□□□□□ -1.88
Trim27Q62158 Gm17890-201ENSMUST00000221419 757 ntBASIC3.31□□□□□ -1.88
Trim27Q62158 n-R5s37-201ENSMUST00000082533 118 ntBASIC3.31□□□□□ -1.88
Trim27Q62158 Mir137-201ENSMUST00000083635 73 ntBASIC3.31□□□□□ -1.88
Trim27Q62158 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
Trim27Q62158 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trim27Q62158 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trim27Q62158 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.3□□□□□ -1.88
Trim27Q62158 Gm13443-201ENSMUST00000120770 555 ntBASIC3.3□□□□□ -1.88
Trim27Q62158 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.3□□□□□ -1.88
Trim27Q62158 Gm22560-201ENSMUST00000157332 120 ntBASIC3.3□□□□□ -1.88
Trim27Q62158 Gm23704-201ENSMUST00000158844 340 ntBASIC3.3□□□□□ -1.88
Trim27Q62158 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.3□□□□□ -1.88
Trim27Q62158 Gm8041-201ENSMUST00000199755 616 ntBASIC3.3□□□□□ -1.88
Trim27Q62158 Gm44600-201ENSMUST00000208540 111 ntBASIC3.3□□□□□ -1.88
Trim27Q62158 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.3□□□□□ -1.88
Trim27Q62158 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trim27Q62158 CT025538.2-201ENSMUST00000226083 772 ntBASIC3.3□□□□□ -1.88
Trim27Q62158 CT025525.2-201ENSMUST00000227743 423 ntBASIC3.3□□□□□ -1.88
Trim27Q62158 AC117202.3-201ENSMUST00000228532 310 ntBASIC3.3□□□□□ -1.88
Trim27Q62158 Gm22061-201ENSMUST00000082557 107 ntBASIC3.3□□□□□ -1.88
Trim27Q62158 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trim27Q62158 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.3□□□□□ -1.88
Trim27Q62158 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trim27Q62158 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim27Q62158 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trim27Q62158 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 Gm22936-201ENSMUST00000103955 126 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 Gm13343-201ENSMUST00000116474 105 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 Gm12386-201ENSMUST00000117380 688 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 Gm11819-201ENSMUST00000122192 372 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 Gm23716-201ENSMUST00000157348 144 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.29□□□□□ -1.88
Trim27Q62158 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trim27Q62158 Gm24264-201ENSMUST00000179835 94 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 Gm27163-201ENSMUST00000184767 409 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 Gm34314-201ENSMUST00000203622 367 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 AC153529.1-201ENSMUST00000217818 370 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 AC116589.9-201ENSMUST00000221462 908 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Trim27Q62158 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC3.29□□□□□ -1.88
Trim27Q62158 Gm22508-201ENSMUST00000082772 110 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 Gm22229-201ENSMUST00000082987 108 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 Mir208a-201ENSMUST00000083498 83 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.29□□□□□ -1.88
Trim27Q62158 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trim27Q62158 Gm23128-201ENSMUST00000104257 132 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 Gm22496-201ENSMUST00000104493 88 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 Gm11582-201ENSMUST00000121041 236 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trim27Q62158 Gm23668-201ENSMUST00000157465 111 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 Gm24291-201ENSMUST00000157633 162 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 Gm25175-201ENSMUST00000178712 79 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 Gm24464-201ENSMUST00000179697 107 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 Gm29216-201ENSMUST00000187117 492 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 Gm28779-201ENSMUST00000189678 323 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 Gm37727-201ENSMUST00000191637 819 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 Gm43355-201ENSMUST00000196541 346 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 Gm23128-202ENSMUST00000196578 133 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 Gm45366-201ENSMUST00000209828 384 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 Gm45395-201ENSMUST00000209891 559 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 Gm7422-201ENSMUST00000220115 640 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 Gm23723-201ENSMUST00000082996 132 ntBASIC3.28□□□□□ -1.88
Trim27Q62158 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trim27Q62158 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Trim27Q62158 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.27□□□□□ -1.89
Trim27Q62158 Mir669p-2-201ENSMUST00000103868 87 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms