Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm23409-201ENSMUST00000158516 237 ntBASIC3.1□□□□□ -1.91
Ctr9Q62018 Nron-204ENSMUST00000158971 370 ntBASIC3.1□□□□□ -1.91
Ctr9Q62018 Mir3076-201ENSMUST00000175415 60 ntBASIC3.1□□□□□ -1.91
Ctr9Q62018 Gm19641-201ENSMUST00000188432 417 ntBASIC3.1□□□□□ -1.91
Ctr9Q62018 Gm28744-201ENSMUST00000189939 340 ntBASIC3.1□□□□□ -1.91
Ctr9Q62018 Gm36984-201ENSMUST00000192770 235 ntBASIC3.1□□□□□ -1.91
Ctr9Q62018 Gm42924-201ENSMUST00000197261 185 ntBASIC3.1□□□□□ -1.91
Ctr9Q62018 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.1□□□□□ -1.91
Ctr9Q62018 Gm44903-201ENSMUST00000206840 130 ntBASIC3.1□□□□□ -1.91
Ctr9Q62018 Gm44754-201ENSMUST00000208155 400 ntBASIC3.1□□□□□ -1.91
Ctr9Q62018 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC3.1□□□□□ -1.91
Ctr9Q62018 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
Ctr9Q62018 AC120394.1-201ENSMUST00000217153 351 ntBASIC3.1□□□□□ -1.91
Ctr9Q62018 AC167192.1-201ENSMUST00000225908 139 ntBASIC3.1□□□□□ -1.91
Ctr9Q62018 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.1□□□□□ -1.91
Ctr9Q62018 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Ctr9Q62018 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Ctr9Q62018 Gm22810-201ENSMUST00000082741 158 ntBASIC3.1□□□□□ -1.91
Ctr9Q62018 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.1□□□□□ -1.91
Ctr9Q62018 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ctr9Q62018 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ctr9Q62018 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm12814-201ENSMUST00000117091 846 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm14292-201ENSMUST00000118761 456 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm13751-201ENSMUST00000120280 752 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm25294-201ENSMUST00000122791 104 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm14333-201ENSMUST00000130484 264 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm22651-201ENSMUST00000157872 94 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm3104-201ENSMUST00000171004 473 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm24082-201ENSMUST00000175175 83 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ctr9Q62018 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm19257-201ENSMUST00000186121 183 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm18775-201ENSMUST00000190763 586 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm37807-201ENSMUST00000194310 190 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm43264-201ENSMUST00000202284 325 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm45687-201ENSMUST00000209454 155 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm18160-201ENSMUST00000214279 827 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 AC112274.2-201ENSMUST00000218436 170 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Gm23932-201ENSMUST00000082914 107 ntBASIC3.09□□□□□ -1.91
Ctr9Q62018 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Ctr9Q62018 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Ctr9Q62018 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.09□□□□□ -1.92
Ctr9Q62018 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Ctr9Q62018 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ctr9Q62018 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm24670-201ENSMUST00000104154 132 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Mir1195-201ENSMUST00000116818 98 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm12225-201ENSMUST00000117995 298 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm14785-201ENSMUST00000120185 539 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm14821-201ENSMUST00000121975 435 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm23886-201ENSMUST00000122684 313 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm23206-201ENSMUST00000122720 184 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm22563-201ENSMUST00000157333 269 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm22076-201ENSMUST00000158601 84 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm23053-201ENSMUST00000175136 96 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm26189-201ENSMUST00000179879 107 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Mir7013-201ENSMUST00000183540 72 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm27599-201ENSMUST00000183758 174 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC3.08□□□□□ -1.92
Ctr9Q62018 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.08□□□□□ -1.92
Ctr9Q62018 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm45049-201ENSMUST00000207586 591 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm6012-201ENSMUST00000210821 730 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm46994-201ENSMUST00000221523 219 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm5955-201ENSMUST00000222712 219 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ctr9Q62018 n-R5s37-201ENSMUST00000082533 118 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ctr9Q62018 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC3.08□□□□□ -1.92
Ctr9Q62018 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.08□□□□□ -1.92
Ctr9Q62018 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ctr9Q62018 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
Ctr9Q62018 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.07□□□□□ -1.92
Ctr9Q62018 Gm22674-201ENSMUST00000104413 131 ntBASIC3.07□□□□□ -1.92
Ctr9Q62018 Gm25728-201ENSMUST00000104525 159 ntBASIC3.07□□□□□ -1.92
Ctr9Q62018 Gm13046-201ENSMUST00000117391 501 ntBASIC3.07□□□□□ -1.92
Ctr9Q62018 Gm15106-201ENSMUST00000119691 821 ntBASIC3.07□□□□□ -1.92
Ctr9Q62018 Gm12825-201ENSMUST00000120249 563 ntBASIC3.07□□□□□ -1.92
Ctr9Q62018 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.07□□□□□ -1.92
Ctr9Q62018 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC3.07□□□□□ -1.92
Ctr9Q62018 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Ctr9Q62018 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms