Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CtcfQ61164 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CtcfQ61164 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CtcfQ61164 Gm43924-201ENSMUST00000204851 1736 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Gm26396-201ENSMUST00000104093 132 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Gm9157-201ENSMUST00000117673 225 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CtcfQ61164 Gm13711-201ENSMUST00000119708 453 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.54□□□□□ -1.84
CtcfQ61164 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.54□□□□□ -1.84
CtcfQ61164 Mir1934-201ENSMUST00000158127 83 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Gm25977-201ENSMUST00000158697 85 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Gm24737-201ENSMUST00000158861 100 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Gm16569-201ENSMUST00000160526 314 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CtcfQ61164 Gm8338-201ENSMUST00000163928 363 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CtcfQ61164 Mir5136-201ENSMUST00000175573 76 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Gm22716-201ENSMUST00000177596 107 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Spin2g-201ENSMUST00000178425 687 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Gm23144-201ENSMUST00000180226 107 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Mir7578-201ENSMUST00000183455 82 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Gm27660-201ENSMUST00000184028 208 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Gm28283-201ENSMUST00000185509 178 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC3.54□□□□□ -1.84
CtcfQ61164 Gm45080-201ENSMUST00000206648 283 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Gm23736-201ENSMUST00000082553 75 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Gm26056-201ENSMUST00000083043 104 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CtcfQ61164 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CtcfQ61164 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CtcfQ61164 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CtcfQ61164 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.54□□□□□ -1.84
CtcfQ61164 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CtcfQ61164 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CtcfQ61164 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CtcfQ61164 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CtcfQ61164 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CtcfQ61164 Gm24275-201ENSMUST00000116780 146 ntBASIC3.53□□□□□ -1.84
CtcfQ61164 Gm14681-201ENSMUST00000118047 411 ntBASIC3.53□□□□□ -1.84
CtcfQ61164 Gm14359-201ENSMUST00000118883 424 ntBASIC3.53□□□□□ -1.84
CtcfQ61164 Gm12803-201ENSMUST00000118907 821 ntBASIC3.53□□□□□ -1.84
CtcfQ61164 Gm13717-201ENSMUST00000119868 365 ntBASIC3.53□□□□□ -1.84
CtcfQ61164 Gm26255-201ENSMUST00000122492 103 ntBASIC3.53□□□□□ -1.84
CtcfQ61164 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CtcfQ61164 Gm22597-201ENSMUST00000157602 80 ntBASIC3.53□□□□□ -1.84
CtcfQ61164 Gm25335-201ENSMUST00000158043 103 ntBASIC3.53□□□□□ -1.84
CtcfQ61164 Mir7081-201ENSMUST00000184490 75 ntBASIC3.53□□□□□ -1.84
CtcfQ61164 Gm29134-201ENSMUST00000186579 126 ntBASIC3.53□□□□□ -1.84
CtcfQ61164 Gm28241-201ENSMUST00000190916 235 ntBASIC3.53□□□□□ -1.84
CtcfQ61164 Gm37692-201ENSMUST00000192633 232 ntBASIC3.53□□□□□ -1.84
CtcfQ61164 Gm19177-201ENSMUST00000204520 613 ntBASIC3.53□□□□□ -1.84
CtcfQ61164 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.53□□□□□ -1.84
CtcfQ61164 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC3.53□□□□□ -1.84
CtcfQ61164 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.53□□□□□ -1.84
CtcfQ61164 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.53□□□□□ -1.84
CtcfQ61164 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CtcfQ61164 Gm2710-201ENSMUST00000073196 603 ntBASIC3.53□□□□□ -1.84
CtcfQ61164 Gm23404-201ENSMUST00000082543 97 ntBASIC3.53□□□□□ -1.84
CtcfQ61164 Mir19a-201ENSMUST00000083482 82 ntBASIC3.53□□□□□ -1.84
CtcfQ61164 Mir101b-201ENSMUST00000083622 97 ntBASIC3.53□□□□□ -1.84
CtcfQ61164 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CtcfQ61164 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CtcfQ61164 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
CtcfQ61164 Gm38388-201ENSMUST00000195569 1430 ntBASIC3.53□□□□□ -1.85
CtcfQ61164 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.52□□□□□ -1.85
CtcfQ61164 Mir759-201ENSMUST00000103254 98 ntBASIC3.52□□□□□ -1.85
CtcfQ61164 Gm15112-201ENSMUST00000120152 860 ntBASIC3.52□□□□□ -1.85
CtcfQ61164 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.52□□□□□ -1.85
CtcfQ61164 Gm24385-201ENSMUST00000122694 350 ntBASIC3.52□□□□□ -1.85
CtcfQ61164 Gm14364-201ENSMUST00000129209 267 ntBASIC3.52□□□□□ -1.85
CtcfQ61164 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CtcfQ61164 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CtcfQ61164 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC3.52□□□□□ -1.85
CtcfQ61164 Gm28002-201ENSMUST00000184832 100 ntBASIC3.52□□□□□ -1.85
CtcfQ61164 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.52□□□□□ -1.85
CtcfQ61164 Gm43406-201ENSMUST00000200356 334 ntBASIC3.52□□□□□ -1.85
CtcfQ61164 Gm2189-201ENSMUST00000201419 429 ntBASIC3.52□□□□□ -1.85
CtcfQ61164 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CtcfQ61164 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.52□□□□□ -1.85
CtcfQ61164 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.52□□□□□ -1.85
CtcfQ61164 Gm2436-201ENSMUST00000219562 774 ntBASIC3.52□□□□□ -1.85
CtcfQ61164 AC167192.2-201ENSMUST00000224794 198 ntBASIC3.52□□□□□ -1.85
CtcfQ61164 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.52□□□□□ -1.85
CtcfQ61164 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.52□□□□□ -1.85
CtcfQ61164 Gm22508-201ENSMUST00000082772 110 ntBASIC3.52□□□□□ -1.85
CtcfQ61164 Gm22229-201ENSMUST00000082987 108 ntBASIC3.52□□□□□ -1.85
CtcfQ61164 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
CtcfQ61164 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CtcfQ61164 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.52□□□□□ -1.85
CtcfQ61164 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CtcfQ61164 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms