Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC2.08□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm42796-201ENSMUST00000199913 1087 ntBASIC2.08□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm19457-201ENSMUST00000200995 448 ntBASIC2.08□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm6590-201ENSMUST00000203343 687 ntBASIC2.08□□□□□ -2.08
Ccdc88aQ5SNZ0 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.08□□□□□ -2.08
Ccdc88aQ5SNZ0 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm25799-201ENSMUST00000082643 107 ntBASIC2.08□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm24928-201ENSMUST00000083399 107 ntBASIC2.08□□□□□ -2.08
Ccdc88aQ5SNZ0 Mir448-201ENSMUST00000083516 112 ntBASIC2.08□□□□□ -2.08
Ccdc88aQ5SNZ0 Mir421-201ENSMUST00000083575 76 ntBASIC2.08□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm25897-201ENSMUST00000083709 107 ntBASIC2.08□□□□□ -2.08
Ccdc88aQ5SNZ0 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Mir667-201ENSMUST00000102441 92 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm25274-201ENSMUST00000104296 135 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm15125-201ENSMUST00000116185 800 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm13603-201ENSMUST00000119404 83 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm12926-201ENSMUST00000121158 409 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm37281-201ENSMUST00000192412 439 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm46312-201ENSMUST00000220961 420 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 AC192088.2-201ENSMUST00000227590 411 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Anp32-ps-201ENSMUST00000118265 388 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Defa-ps1-201ENSMUST00000119062 282 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Defa-ps6-201ENSMUST00000122172 282 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm25831-201ENSMUST00000158924 163 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm22693-201ENSMUST00000175049 442 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Mup-ps8-201ENSMUST00000178663 545 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Mup-ps6-201ENSMUST00000179564 545 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 AC121114.1-201ENSMUST00000228522 570 ntBASIC2.07□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm649-201ENSMUST00000117284 1054 ntBASIC2.06□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm15193-201ENSMUST00000120224 865 ntBASIC2.06□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.06□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm23033-201ENSMUST00000157996 134 ntBASIC2.06□□□□□ -2.08
Ccdc88aQ5SNZ0 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc88aQ5SNZ0 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.06□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm43228-201ENSMUST00000200735 264 ntBASIC2.06□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm19649-201ENSMUST00000201126 822 ntBASIC2.06□□□□□ -2.08
Ccdc88aQ5SNZ0 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC2.06□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm45023-201ENSMUST00000207951 379 ntBASIC2.06□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.06□□□□□ -2.08
Ccdc88aQ5SNZ0 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.06□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm22293-201ENSMUST00000083314 109 ntBASIC2.06□□□□□ -2.08
Ccdc88aQ5SNZ0 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm12881-201ENSMUST00000121191 203 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm26101-201ENSMUST00000157246 105 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm22390-201ENSMUST00000157588 325 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm22839-201ENSMUST00000158436 304 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm9022-202ENSMUST00000183285 483 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm44727-201ENSMUST00000204225 451 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm44881-201ENSMUST00000205425 367 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm18892-201ENSMUST00000217628 881 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 AC131068.1-201ENSMUST00000226891 482 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Mir301b-201ENSMUST00000102333 97 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm25097-201ENSMUST00000104042 145 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm11357-201ENSMUST00000119758 954 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm25666-201ENSMUST00000157702 107 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm24770-201ENSMUST00000158505 92 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm22776-201ENSMUST00000178634 94 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm23767-201ENSMUST00000179278 94 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm6113-201ENSMUST00000180319 639 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Mir7059-201ENSMUST00000184825 59 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm28951-201ENSMUST00000190742 313 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm18956-201ENSMUST00000192857 480 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm32033-201ENSMUST00000193483 339 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm26439-201ENSMUST00000082592 106 ntBASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Ccdc88aQ5SNZ0 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm11367-201ENSMUST00000117802 120 ntBASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm13087-201ENSMUST00000118298 256 ntBASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm2288-201ENSMUST00000118560 638 ntBASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm23463-201ENSMUST00000122468 99 ntBASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm24111-201ENSMUST00000175491 97 ntBASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm18397-201ENSMUST00000176704 587 ntBASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm7329-201ENSMUST00000185915 210 ntBASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm28200-201ENSMUST00000187778 315 ntBASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm29378-201ENSMUST00000188723 315 ntBASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm28909-201ENSMUST00000189406 315 ntBASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms