Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Mir3112-201ENSMUST00000175431 82 ntBASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Gm22252-201ENSMUST00000179316 79 ntBASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Gm25942-201ENSMUST00000180080 110 ntBASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Gm9541-201ENSMUST00000188409 502 ntBASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Gm20776-201ENSMUST00000189940 700 ntBASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Trbv27-201ENSMUST00000193711 277 ntBASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Gm7871-201ENSMUST00000195346 618 ntBASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Gm43171-201ENSMUST00000199882 291 ntBASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Gm44182-201ENSMUST00000204052 115 ntBASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Mir223-201ENSMUST00000102112 110 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Gm13355-201ENSMUST00000117996 317 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Gm12392-201ENSMUST00000118014 938 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Gm13406-201ENSMUST00000121991 256 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Defa-ps6-201ENSMUST00000122172 282 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Gm26256-201ENSMUST00000122499 186 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Gm23221-201ENSMUST00000158118 93 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Gm4468-201ENSMUST00000170206 294 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Gm29657-201ENSMUST00000189807 342 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Gm43007-201ENSMUST00000197618 291 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Gm17893-201ENSMUST00000203017 770 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Gm6991-201ENSMUST00000218475 1178 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Gm5374-201ENSMUST00000222868 657 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Olfr197-201ENSMUST00000080031 926 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Snora3-201ENSMUST00000083082 132 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Gm10343-201ENSMUST00000096279 348 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Gm43216-201ENSMUST00000196295 1333 ntBASIC1.03□□□□□ -2.24
Trav3-1Q5R1I8 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.25
Trav3-1Q5R1I8 Mir653-201ENSMUST00000102402 85 ntBASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Gm24716-201ENSMUST00000157524 104 ntBASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Gm22944-201ENSMUST00000158662 133 ntBASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Gm17061-201ENSMUST00000163167 499 ntBASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Gm17062-201ENSMUST00000166987 461 ntBASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Mir6399-201ENSMUST00000184050 84 ntBASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Gm28113-201ENSMUST00000188280 229 ntBASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Igkv1-136-201ENSMUST00000200635 297 ntBASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Gm5317-201ENSMUST00000204445 847 ntBASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Gm44857-201ENSMUST00000208331 196 ntBASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 CR974485.1-201ENSMUST00000222408 402 ntBASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 CT030704.1-201ENSMUST00000227521 699 ntBASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Gm23727-201ENSMUST00000083352 164 ntBASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Trav3-1Q5R1I8 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gm25759-201ENSMUST00000103988 129 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gm23803-201ENSMUST00000104610 132 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gm11268-201ENSMUST00000118347 267 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gm7350-201ENSMUST00000120964 636 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gm14821-201ENSMUST00000121975 435 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gm16328-201ENSMUST00000126985 196 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gm23713-201ENSMUST00000157353 70 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gm22615-201ENSMUST00000158102 70 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gm26215-201ENSMUST00000158584 139 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gm24174-201ENSMUST00000158933 111 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gm27834-201ENSMUST00000183427 125 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gm27773-201ENSMUST00000184087 78 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gm43979-201ENSMUST00000203179 475 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gm44533-201ENSMUST00000207782 268 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 AC123533.1-201ENSMUST00000227782 446 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 AC137902.2-201ENSMUST00000227989 576 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gm25853-201ENSMUST00000082793 132 ntBASIC1.01□□□□□ -2.25
Trav3-1Q5R1I8 Gm43046-201ENSMUST00000198771 2451 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm22674-201ENSMUST00000104413 131 ntBASIC1□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms