Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm13406-201ENSMUST00000121991 256 ntBASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 Gm25666-201ENSMUST00000157702 107 ntBASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 Gm17161-201ENSMUST00000169187 524 ntBASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 Gm4468-201ENSMUST00000170206 294 ntBASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 Gm27443-201ENSMUST00000184660 98 ntBASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 Gm43582-201ENSMUST00000196149 343 ntBASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 Ighv1-68-201ENSMUST00000198789 294 ntBASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 Gm18338-201ENSMUST00000222381 560 ntBASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 CT025552.1-201ENSMUST00000224561 521 ntBASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 Gm25402-201ENSMUST00000082966 131 ntBASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 Mir30d-201ENSMUST00000083503 82 ntBASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 AC153881.3-201ENSMUST00000218494 1561 ntBASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Trav5d-4Q5R1F6 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
Trav5d-4Q5R1F6 Gm26342-201ENSMUST00000104557 129 ntBASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Gm12607-201ENSMUST00000120724 493 ntBASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Gm13555-201ENSMUST00000121668 319 ntBASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Gm16328-201ENSMUST00000126985 196 ntBASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Gm25961-201ENSMUST00000157174 135 ntBASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Gm9071-201ENSMUST00000165915 474 ntBASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Mir6541-201ENSMUST00000183649 110 ntBASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Mir6950-201ENSMUST00000184438 73 ntBASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Gm27959-201ENSMUST00000185172 111 ntBASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Gm29389-201ENSMUST00000191562 352 ntBASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Gm7871-201ENSMUST00000195346 618 ntBASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Gm44041-201ENSMUST00000203678 396 ntBASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Gm44058-201ENSMUST00000204335 467 ntBASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Gm43865-201ENSMUST00000204721 127 ntBASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Gm26206-201ENSMUST00000082908 110 ntBASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.65□□□□□ -2.15
Trav5d-4Q5R1F6 Gm43896-201ENSMUST00000203440 2032 ntBASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 Gm9001-201ENSMUST00000121642 399 ntBASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 Gm18964-201ENSMUST00000193013 563 ntBASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 Gm37119-201ENSMUST00000195691 389 ntBASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 Gm18268-201ENSMUST00000208445 943 ntBASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 Gm45438-201ENSMUST00000210242 564 ntBASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 Gm20948-201ENSMUST00000211091 449 ntBASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 Gm46193-201ENSMUST00000219399 364 ntBASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 Gm22353-201ENSMUST00000083918 136 ntBASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 Gm17969-201ENSMUST00000185706 2557 ntBASIC1.64□□□□□ -2.15
Trav5d-4Q5R1F6 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 Gm24907-201ENSMUST00000116932 128 ntBASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 Gm11935-201ENSMUST00000118608 399 ntBASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 Gm23885-201ENSMUST00000122682 294 ntBASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 Mir3103-201ENSMUST00000175474 67 ntBASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 Mir7062-201ENSMUST00000185038 66 ntBASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 Gm20776-201ENSMUST00000189940 700 ntBASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 Mir378a-201ENSMUST00000198300 66 ntBASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 Gm43978-201ENSMUST00000203491 451 ntBASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 Gm18000-201ENSMUST00000212153 800 ntBASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 Gm31849-201ENSMUST00000220306 375 ntBASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 Gm25124-201ENSMUST00000083345 164 ntBASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.63□□□□□ -2.15
Trav5d-4Q5R1F6 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
Trav5d-4Q5R1F6 Gm26077-201ENSMUST00000104064 123 ntBASIC1.62□□□□□ -2.15
Trav5d-4Q5R1F6 Gm13331-201ENSMUST00000117500 448 ntBASIC1.62□□□□□ -2.15
Trav5d-4Q5R1F6 Gm11438-201ENSMUST00000121582 189 ntBASIC1.62□□□□□ -2.15
Trav5d-4Q5R1F6 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.62□□□□□ -2.15
Trav5d-4Q5R1F6 Gm24478-201ENSMUST00000157439 158 ntBASIC1.62□□□□□ -2.15
Trav5d-4Q5R1F6 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.62□□□□□ -2.15
Trav5d-4Q5R1F6 Gm20794-201ENSMUST00000177626 628 ntBASIC1.62□□□□□ -2.15
Trav5d-4Q5R1F6 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.62□□□□□ -2.15
Trav5d-4Q5R1F6 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.62□□□□□ -2.15
Trav5d-4Q5R1F6 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.62□□□□□ -2.15
Trav5d-4Q5R1F6 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.62□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms