Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Trav6-3Q5R1E6 Gm5471-201ENSMUST00000072732 337 ntBASIC1.96□□□□□ -2.1
Trav6-3Q5R1E6 Gm24948-201ENSMUST00000082866 207 ntBASIC1.96□□□□□ -2.1
Trav6-3Q5R1E6 AC154481.2-201ENSMUST00000222526 3175 ntBASIC1.96□□□□□ -2.1
Trav6-3Q5R1E6 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trav6-3Q5R1E6 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Trav6-3Q5R1E6 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC1.96□□□□□ -2.1
Trav6-3Q5R1E6 AC115891.1-201ENSMUST00000215798 1755 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm38071-201ENSMUST00000195792 3378 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Mir682-201ENSMUST00000102281 96 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm24670-201ENSMUST00000104154 132 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm24910-201ENSMUST00000157289 272 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm23078-201ENSMUST00000157848 148 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm23025-201ENSMUST00000158769 111 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm3111-201ENSMUST00000167426 490 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Mir3964-201ENSMUST00000174898 74 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm27698-201ENSMUST00000184060 249 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm5116-201ENSMUST00000187732 463 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm29627-201ENSMUST00000187984 463 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm28474-201ENSMUST00000188501 315 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm29263-201ENSMUST00000188718 463 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm28384-201ENSMUST00000189079 463 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm18692-201ENSMUST00000193047 511 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm19066-201ENSMUST00000193232 1078 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm37104-201ENSMUST00000193278 196 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm45049-201ENSMUST00000207586 591 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 AC154506.1-201ENSMUST00000225178 621 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 AC161572.1-201ENSMUST00000227486 640 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 CT025525.2-201ENSMUST00000227743 423 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Gm10088-201ENSMUST00000074116 423 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 n-R5s176-201ENSMUST00000082683 109 ntBASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
Trav6-3Q5R1E6 AC125223.3-201ENSMUST00000223588 2067 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm24127-201ENSMUST00000104110 130 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm12393-201ENSMUST00000117084 848 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm12598-201ENSMUST00000117333 830 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm11407-201ENSMUST00000120362 1058 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm13210-201ENSMUST00000121483 273 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm15065-201ENSMUST00000121699 273 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm23668-201ENSMUST00000157465 111 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm24210-201ENSMUST00000158263 133 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm3104-201ENSMUST00000171004 473 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm21638-201ENSMUST00000179473 836 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm24306-201ENSMUST00000180229 79 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm27470-201ENSMUST00000184070 210 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm29658-201ENSMUST00000185404 230 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm29452-201ENSMUST00000187996 313 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm28860-201ENSMUST00000188103 313 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm28745-201ENSMUST00000190069 305 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm43722-201ENSMUST00000196054 124 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm44718-201ENSMUST00000206886 359 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm45232-201ENSMUST00000207811 162 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm45395-201ENSMUST00000209891 559 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm2628-201ENSMUST00000218019 426 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 CT571268.1-201ENSMUST00000222320 407 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 AC154262.1-201ENSMUST00000225976 286 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 AC131029.2-202ENSMUST00000228430 496 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Mir103-2-201ENSMUST00000083629 86 ntBASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Trav6-3Q5R1E6 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trav6-3Q5R1E6 Gm42482-201ENSMUST00000198904 1947 ntBASIC1.93□□□□□ -2.1
Trav6-3Q5R1E6 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Trav6-3Q5R1E6 Gm37479-201ENSMUST00000194169 3841 ntBASIC1.93□□□□□ -2.1
Trav6-3Q5R1E6 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Trav6-3Q5R1E6 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Trav6-3Q5R1E6 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC1.93□□□□□ -2.1
Trav6-3Q5R1E6 Mir466k-201ENSMUST00000116774 122 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms