Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm27942-201ENSMUST00000184669 101 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm18667-201ENSMUST00000186523 484 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm28200-201ENSMUST00000187778 315 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm29378-201ENSMUST00000188723 315 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm28909-201ENSMUST00000189406 315 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm25124-201ENSMUST00000083345 164 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Snora69-201ENSMUST00000083708 131 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm26301-201ENSMUST00000104813 95 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm2066-201ENSMUST00000118046 389 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm2318-201ENSMUST00000119623 639 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm12105-201ENSMUST00000120846 779 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm14736-201ENSMUST00000121470 336 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm13676-201ENSMUST00000122185 591 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm26101-201ENSMUST00000157246 105 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm22521-201ENSMUST00000158272 134 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm7438-201ENSMUST00000177664 639 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm7408-201ENSMUST00000178014 639 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm7386-201ENSMUST00000178020 639 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm3657-201ENSMUST00000178170 639 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm7415-201ENSMUST00000178205 639 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm7398-201ENSMUST00000178589 639 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm7391-201ENSMUST00000178680 639 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm7375-201ENSMUST00000179232 639 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm3681-201ENSMUST00000179940 639 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm27342-201ENSMUST00000183530 109 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm37684-201ENSMUST00000192779 355 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm38018-201ENSMUST00000195651 540 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm44938-201ENSMUST00000208614 427 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 CT025606.1-201ENSMUST00000218273 324 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm22575-201ENSMUST00000082981 110 ntBASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC1.81□□□□□ -2.12
Col27a1Q5QNQ9 Gm17976-201ENSMUST00000184037 1909 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Gm8403-201ENSMUST00000189712 1298 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Gm37281-201ENSMUST00000192412 439 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Gm37692-201ENSMUST00000192633 232 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Gm17935-201ENSMUST00000196649 772 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Gm42465-201ENSMUST00000197036 492 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 AC153506.2-201ENSMUST00000218051 257 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 AC167977.1-201ENSMUST00000221384 234 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 AC159293.2-201ENSMUST00000222289 424 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 AC147639.1-201ENSMUST00000224216 661 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Gm5471-201ENSMUST00000072732 337 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Gm22978-201ENSMUST00000082607 160 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Gm17186-201ENSMUST00000171742 456 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Gm28163-201ENSMUST00000187099 325 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Gm9632-201ENSMUST00000195934 643 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Gm46312-201ENSMUST00000220961 420 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Gm23932-201ENSMUST00000082914 107 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 n-R5s196-201ENSMUST00000083136 117 ntBASIC1.8□□□□□ -2.12
Col27a1Q5QNQ9 Mir599-201ENSMUST00000102378 88 ntBASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Gm6923-201ENSMUST00000118343 406 ntBASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Gm13678-201ENSMUST00000118926 340 ntBASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Gm13603-201ENSMUST00000119404 83 ntBASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Gm22776-201ENSMUST00000178634 94 ntBASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Gm23767-201ENSMUST00000179278 94 ntBASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Gm7858-201ENSMUST00000190177 622 ntBASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Gm20811-201ENSMUST00000190500 553 ntBASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Gm19123-201ENSMUST00000190716 651 ntBASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Gm37708-201ENSMUST00000192337 895 ntBASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Gm44881-201ENSMUST00000205425 367 ntBASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 CT030187.1-201ENSMUST00000220605 252 ntBASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 AC147545.1-201ENSMUST00000227528 108 ntBASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 AC154532.2-201ENSMUST00000228947 598 ntBASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Gm37598-201ENSMUST00000194506 1301 ntBASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Gm44562-201ENSMUST00000207194 1347 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 130 ms