Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm25451-201ENSMUST00000177832 121 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm23568-201ENSMUST00000177960 92 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm24829-201ENSMUST00000179245 92 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Usp28Q5I043 Mir6916-201ENSMUST00000184514 63 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm37037-201ENSMUST00000194475 424 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm42924-201ENSMUST00000197261 185 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm43026-201ENSMUST00000202972 325 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm44990-201ENSMUST00000203922 217 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.51□□□□□ -2.01
Usp28Q5I043 AC162931.1-201ENSMUST00000214184 267 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.51□□□□□ -2.01
Usp28Q5I043 AC111046.1-201ENSMUST00000217715 412 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm46994-201ENSMUST00000221523 219 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm5955-201ENSMUST00000222712 219 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 AC132918.1-201ENSMUST00000227877 925 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm7984-201ENSMUST00000060640 538 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.5□□□□□ -2.01
Usp28Q5I043 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.5□□□□□ -2.01
Usp28Q5I043 Gm11490-201ENSMUST00000118128 272 ntBASIC2.5□□□□□ -2.01
Usp28Q5I043 Gm12102-201ENSMUST00000118251 604 ntBASIC2.5□□□□□ -2.01
Usp28Q5I043 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC2.5□□□□□ -2.01
Usp28Q5I043 Gm12156-201ENSMUST00000119188 554 ntBASIC2.5□□□□□ -2.01
Usp28Q5I043 Gm4540-201ENSMUST00000170669 429 ntBASIC2.5□□□□□ -2.01
Usp28Q5I043 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC2.5□□□□□ -2.01
Usp28Q5I043 Mir6383-201ENSMUST00000184545 116 ntBASIC2.5□□□□□ -2.01
Usp28Q5I043 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.5□□□□□ -2.01
Usp28Q5I043 Gm19649-201ENSMUST00000201126 822 ntBASIC2.5□□□□□ -2.01
Usp28Q5I043 Gm43232-201ENSMUST00000201346 364 ntBASIC2.5□□□□□ -2.01
Usp28Q5I043 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.5□□□□□ -2.01
Usp28Q5I043 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.5□□□□□ -2.01
Usp28Q5I043 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.5□□□□□ -2.01
Usp28Q5I043 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Usp28Q5I043 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.5□□□□□ -2.01
Usp28Q5I043 Gm10343-201ENSMUST00000096279 348 ntBASIC2.5□□□□□ -2.01
Usp28Q5I043 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Usp28Q5I043 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Usp28Q5I043 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm25088-201ENSMUST00000101803 79 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm22591-201ENSMUST00000104243 106 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm12598-201ENSMUST00000117333 830 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm14833-201ENSMUST00000118345 1027 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm14835-201ENSMUST00000119039 315 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm12044-201ENSMUST00000120335 213 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm26099-201ENSMUST00000157248 109 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm22563-201ENSMUST00000157333 269 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm24075-201ENSMUST00000158175 72 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm23025-201ENSMUST00000158769 111 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm20450-201ENSMUST00000173652 147 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm18396-201ENSMUST00000177095 361 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm27755-201ENSMUST00000184623 132 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Mir6372-201ENSMUST00000185114 109 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm17771-201ENSMUST00000194477 1147 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm38154-201ENSMUST00000195444 340 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm15235-201ENSMUST00000200572 194 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm45173-201ENSMUST00000206819 305 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 AC140785.1-201ENSMUST00000217782 383 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 AC101677.1-201ENSMUST00000218590 158 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm4921-201ENSMUST00000219804 992 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Usp28Q5I043 AC134860.6-201ENSMUST00000226038 285 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 AC164597.2-201ENSMUST00000226738 603 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 AC154484.1-201ENSMUST00000227311 771 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC2.49□□□□□ -2.01
Usp28Q5I043 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Usp28Q5I043 Gm24035-201ENSMUST00000082867 107 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.49□□□□□ -2.01
Usp28Q5I043 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
Usp28Q5I043 Mir344c-201ENSMUST00000103919 92 ntBASIC2.48□□□□□ -2.01
Usp28Q5I043 Gm24274-201ENSMUST00000116787 124 ntBASIC2.48□□□□□ -2.01
Usp28Q5I043 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.48□□□□□ -2.01
Usp28Q5I043 Gm25107-201ENSMUST00000122472 129 ntBASIC2.48□□□□□ -2.01
Usp28Q5I043 Gm23889-201ENSMUST00000122689 104 ntBASIC2.48□□□□□ -2.01
Usp28Q5I043 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.48□□□□□ -2.01
Usp28Q5I043 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.48□□□□□ -2.01
Usp28Q5I043 Gm22236-201ENSMUST00000157093 106 ntBASIC2.48□□□□□ -2.01
Usp28Q5I043 Gm23538-201ENSMUST00000157535 101 ntBASIC2.48□□□□□ -2.01
Usp28Q5I043 Gm22093-201ENSMUST00000158980 111 ntBASIC2.48□□□□□ -2.01
Usp28Q5I043 Gm3111-201ENSMUST00000167426 490 ntBASIC2.48□□□□□ -2.01
Usp28Q5I043 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Usp28Q5I043 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.48□□□□□ -2.01
Usp28Q5I043 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.48□□□□□ -2.01
Usp28Q5I043 Gm23269-201ENSMUST00000178701 107 ntBASIC2.48□□□□□ -2.01
Usp28Q5I043 Mir6382-201ENSMUST00000184055 110 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms