Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Ccdc88bQ4QRL3 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Ccdc88bQ4QRL3 Gm25495-201ENSMUST00000104431 131 ntBASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 Mir3096-201ENSMUST00000116685 71 ntBASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 Gm13876-201ENSMUST00000118451 261 ntBASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 Gm22345-201ENSMUST00000122644 107 ntBASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 Gm22603-201ENSMUST00000157603 96 ntBASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 Gm29263-201ENSMUST00000188718 463 ntBASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 Gm28384-201ENSMUST00000189079 463 ntBASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 Gm44059-201ENSMUST00000204048 351 ntBASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 Gm24632-201ENSMUST00000122770 323 ntBASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 Gm27025-201ENSMUST00000182392 942 ntBASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 Mir6381-201ENSMUST00000183426 87 ntBASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 Gm27607-201ENSMUST00000185162 122 ntBASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 Gm19233-201ENSMUST00000219772 936 ntBASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 Gm35558-202ENSMUST00000221819 499 ntBASIC1.94□□□□□ -2.1
Ccdc88bQ4QRL3 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.93□□□□□ -2.1
Ccdc88bQ4QRL3 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
Ccdc88bQ4QRL3 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Ccdc88bQ4QRL3 Gm17162-201ENSMUST00000168538 473 ntBASIC1.93□□□□□ -2.1
Ccdc88bQ4QRL3 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC1.93□□□□□ -2.1
Ccdc88bQ4QRL3 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.93□□□□□ -2.1
Ccdc88bQ4QRL3 Gm44349-201ENSMUST00000197048 123 ntBASIC1.93□□□□□ -2.1
Ccdc88bQ4QRL3 Gm3442-201ENSMUST00000216808 710 ntBASIC1.93□□□□□ -2.1
Ccdc88bQ4QRL3 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Ccdc88bQ4QRL3 AC132121.1-201ENSMUST00000220774 332 ntBASIC1.93□□□□□ -2.1
Ccdc88bQ4QRL3 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.93□□□□□ -2.1
Ccdc88bQ4QRL3 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.92□□□□□ -2.1
Ccdc88bQ4QRL3 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC1.92□□□□□ -2.1
Ccdc88bQ4QRL3 Gm28169-201ENSMUST00000190342 345 ntBASIC1.92□□□□□ -2.1
Ccdc88bQ4QRL3 Gm18964-201ENSMUST00000193013 563 ntBASIC1.92□□□□□ -2.1
Ccdc88bQ4QRL3 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Ccdc88bQ4QRL3 Gm13640-201ENSMUST00000118445 264 ntBASIC1.91□□□□□ -2.1
Ccdc88bQ4QRL3 Gm13460-201ENSMUST00000121274 353 ntBASIC1.91□□□□□ -2.1
Ccdc88bQ4QRL3 Snora24-201ENSMUST00000174989 130 ntBASIC1.91□□□□□ -2.1
Ccdc88bQ4QRL3 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC1.91□□□□□ -2.1
Ccdc88bQ4QRL3 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Ccdc88bQ4QRL3 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC1.91□□□□□ -2.1
Ccdc88bQ4QRL3 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Ccdc88bQ4QRL3 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.9□□□□□ -2.11
Ccdc88bQ4QRL3 Gm25625-201ENSMUST00000157221 96 ntBASIC1.9□□□□□ -2.11
Ccdc88bQ4QRL3 Gm25658-201ENSMUST00000158472 128 ntBASIC1.9□□□□□ -2.11
Ccdc88bQ4QRL3 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Ccdc88bQ4QRL3 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC1.9□□□□□ -2.11
Ccdc88bQ4QRL3 Gm19649-201ENSMUST00000201126 822 ntBASIC1.9□□□□□ -2.11
Ccdc88bQ4QRL3 Gm45696-201ENSMUST00000212088 985 ntBASIC1.9□□□□□ -2.11
Ccdc88bQ4QRL3 Gm8125-201ENSMUST00000216602 738 ntBASIC1.9□□□□□ -2.11
Ccdc88bQ4QRL3 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC1.9□□□□□ -2.11
Ccdc88bQ4QRL3 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Ccdc88bQ4QRL3 Gm24551-201ENSMUST00000158645 92 ntBASIC1.89□□□□□ -2.11
Ccdc88bQ4QRL3 Gm15143-201ENSMUST00000178180 714 ntBASIC1.89□□□□□ -2.11
Ccdc88bQ4QRL3 Gm23190-201ENSMUST00000180307 64 ntBASIC1.89□□□□□ -2.11
Ccdc88bQ4QRL3 Gm36954-201ENSMUST00000195362 363 ntBASIC1.89□□□□□ -2.11
Ccdc88bQ4QRL3 Gm33866-201ENSMUST00000196911 289 ntBASIC1.89□□□□□ -2.11
Ccdc88bQ4QRL3 Gm43680-201ENSMUST00000199466 340 ntBASIC1.89□□□□□ -2.11
Ccdc88bQ4QRL3 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ccdc88bQ4QRL3 Gm18598-201ENSMUST00000207724 597 ntBASIC1.89□□□□□ -2.11
Ccdc88bQ4QRL3 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.89□□□□□ -2.11
Ccdc88bQ4QRL3 AC123860.1-201ENSMUST00000228033 481 ntBASIC1.89□□□□□ -2.11
Ccdc88bQ4QRL3 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.89□□□□□ -2.11
Ccdc88bQ4QRL3 Gm24165-201ENSMUST00000082718 128 ntBASIC1.89□□□□□ -2.11
Ccdc88bQ4QRL3 Mir22-201ENSMUST00000083595 95 ntBASIC1.89□□□□□ -2.11
Ccdc88bQ4QRL3 Gm8207-201ENSMUST00000171204 502 ntBASIC1.88□□□□□ -2.11
Ccdc88bQ4QRL3 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Ccdc88bQ4QRL3 Gm44666-201ENSMUST00000208544 391 ntBASIC1.88□□□□□ -2.11
Ccdc88bQ4QRL3 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC1.88□□□□□ -2.11
Ccdc88bQ4QRL3 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Ccdc88bQ4QRL3 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Ccdc88bQ4QRL3 Snord65-201ENSMUST00000104269 72 ntBASIC1.88□□□□□ -2.11
Ccdc88bQ4QRL3 Gm25321-201ENSMUST00000122558 102 ntBASIC1.88□□□□□ -2.11
Ccdc88bQ4QRL3 Gm24813-201ENSMUST00000175310 84 ntBASIC1.88□□□□□ -2.11
Ccdc88bQ4QRL3 Gm27161-201ENSMUST00000183960 562 ntBASIC1.88□□□□□ -2.11
Ccdc88bQ4QRL3 Gm27419-201ENSMUST00000184576 109 ntBASIC1.88□□□□□ -2.11
Ccdc88bQ4QRL3 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC1.88□□□□□ -2.11
Ccdc88bQ4QRL3 Gm43115-201ENSMUST00000196244 160 ntBASIC1.88□□□□□ -2.11
Ccdc88bQ4QRL3 Gm2142-201ENSMUST00000197899 589 ntBASIC1.88□□□□□ -2.11
Ccdc88bQ4QRL3 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Ccdc88bQ4QRL3 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.88□□□□□ -2.11
Ccdc88bQ4QRL3 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Ccdc88bQ4QRL3 Gm12587-201ENSMUST00000120180 427 ntBASIC1.87□□□□□ -2.11
Ccdc88bQ4QRL3 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC1.87□□□□□ -2.11
Ccdc88bQ4QRL3 Gm42454-201ENSMUST00000196805 1181 ntBASIC1.87□□□□□ -2.11
Ccdc88bQ4QRL3 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.87□□□□□ -2.11
Ccdc88bQ4QRL3 Gm25526-201ENSMUST00000104332 132 ntBASIC1.86□□□□□ -2.11
Ccdc88bQ4QRL3 Gm25901-201ENSMUST00000158494 130 ntBASIC1.86□□□□□ -2.11
Ccdc88bQ4QRL3 Gm26178-201ENSMUST00000177706 107 ntBASIC1.86□□□□□ -2.11
Ccdc88bQ4QRL3 Gm23151-201ENSMUST00000178061 107 ntBASIC1.86□□□□□ -2.11
Ccdc88bQ4QRL3 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Ccdc88bQ4QRL3 Snord14a-201ENSMUST00000082807 87 ntBASIC1.86□□□□□ -2.11
Ccdc88bQ4QRL3 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ccdc88bQ4QRL3 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ccdc88bQ4QRL3 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.85□□□□□ -2.11
Ccdc88bQ4QRL3 Gm23207-201ENSMUST00000158665 102 ntBASIC1.85□□□□□ -2.11
Ccdc88bQ4QRL3 Gm27233-201ENSMUST00000184030 307 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms