Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm17946-201ENSMUST00000186856 538 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm28151-201ENSMUST00000189404 951 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm30341-201ENSMUST00000194363 289 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm18982-201ENSMUST00000198118 529 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm44324-201ENSMUST00000198517 135 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm44910-201ENSMUST00000208451 396 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
Trim40Q3UWA4 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm22974-201ENSMUST00000083301 103 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm23097-201ENSMUST00000083448 105 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2.68□□□□□ -1.98
Trim40Q3UWA4 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm11285-201ENSMUST00000118443 322 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm7209-201ENSMUST00000122339 333 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm22956-201ENSMUST00000122520 80 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm22631-201ENSMUST00000179656 94 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm22633-201ENSMUST00000179834 107 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm21673-201ENSMUST00000186640 436 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm29597-201ENSMUST00000188035 308 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm10193-201ENSMUST00000188288 231 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm21135-201ENSMUST00000189023 436 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm6801-201ENSMUST00000190697 339 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm42164-201ENSMUST00000198881 379 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm38395-201ENSMUST00000199904 830 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm45101-201ENSMUST00000208327 232 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm7624-201ENSMUST00000209702 435 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.68□□□□□ -1.98
Trim40Q3UWA4 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Trim40Q3UWA4 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm9845-201ENSMUST00000056409 598 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm22061-201ENSMUST00000082557 107 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 n-R5s85-201ENSMUST00000083453 113 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Snord38a-201ENSMUST00000083746 71 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm23847-201ENSMUST00000083829 110 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.68□□□□□ -1.98
Trim40Q3UWA4 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Gm12433-201ENSMUST00000119659 255 ntBASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Gm12042-201ENSMUST00000120479 301 ntBASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Gm15120-201ENSMUST00000120602 301 ntBASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Gm13424-201ENSMUST00000122301 354 ntBASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Gm24901-201ENSMUST00000158125 110 ntBASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Gm22416-201ENSMUST00000158590 88 ntBASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Gm25119-201ENSMUST00000158815 88 ntBASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Gm27520-201ENSMUST00000184872 81 ntBASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Gm37743-201ENSMUST00000194645 376 ntBASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC2.67□□□□□ -1.98
Trim40Q3UWA4 AC116589.1-201ENSMUST00000220634 327 ntBASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Gm35558-203ENSMUST00000222264 204 ntBASIC2.67□□□□□ -1.98
Trim40Q3UWA4 AC164297.5-201ENSMUST00000224365 198 ntBASIC2.67□□□□□ -1.98
Trim40Q3UWA4 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.67□□□□□ -1.98
Trim40Q3UWA4 CT025603.4-201ENSMUST00000225777 413 ntBASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.67□□□□□ -1.98
Trim40Q3UWA4 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm26341-201ENSMUST00000104561 134 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm15190-201ENSMUST00000120855 276 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm15799-201ENSMUST00000120899 289 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 AA413626-201ENSMUST00000121125 494 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm11849-201ENSMUST00000121293 261 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm8207-201ENSMUST00000171204 502 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm20698-201ENSMUST00000175657 233 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm20672-201ENSMUST00000176605 261 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm21842-201ENSMUST00000177552 498 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm21626-201ENSMUST00000177791 498 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms