Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm25199-201ENSMUST00000083095 104 ntBASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm25094-201ENSMUST00000103992 131 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 Gm14579-201ENSMUST00000117068 283 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 Gm11219-201ENSMUST00000118565 358 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 Gm2768-201ENSMUST00000121062 250 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 Gm22563-201ENSMUST00000157333 269 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 Gm24552-201ENSMUST00000158646 103 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 Gm24925-201ENSMUST00000178157 107 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 Gm23648-201ENSMUST00000180301 107 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 Mir6353-201ENSMUST00000183596 113 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 Mir6372-201ENSMUST00000185114 109 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 Gm17929-201ENSMUST00000186851 627 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 CT009550.5-201ENSMUST00000226286 382 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 Gm23723-201ENSMUST00000082996 132 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 Gm23506-201ENSMUST00000083077 107 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 Mir463-201ENSMUST00000093570 75 ntBASIC2.49□□□□□ -2.01
Upf3aQ3ULJ3 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Gm13239-201ENSMUST00000119920 637 ntBASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Gm12640-201ENSMUST00000120097 310 ntBASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Gm25945-201ENSMUST00000122484 135 ntBASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Gm26177-201ENSMUST00000178683 107 ntBASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Gm21894-201ENSMUST00000179631 546 ntBASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Mir6363-201ENSMUST00000184880 114 ntBASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Gm18448-201ENSMUST00000186286 599 ntBASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Gm29640-201ENSMUST00000187972 278 ntBASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Gm43804-201ENSMUST00000198280 456 ntBASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Gm44050-201ENSMUST00000204263 527 ntBASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Gm8031-201ENSMUST00000213430 626 ntBASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Mir322-201ENSMUST00000083484 95 ntBASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Upf3aQ3ULJ3 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Gm12941-201ENSMUST00000117934 220 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Gm11490-201ENSMUST00000118128 272 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Gm11363-201ENSMUST00000121672 548 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Gm16354-201ENSMUST00000155376 150 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Gm24959-201ENSMUST00000157924 146 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Gm26271-201ENSMUST00000158349 104 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Gm5277-201ENSMUST00000164923 556 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Gm17183-201ENSMUST00000171170 493 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Gm27869-201ENSMUST00000184327 122 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Gm28802-201ENSMUST00000188624 944 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Gm6060-201ENSMUST00000188671 251 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Gm44060-201ENSMUST00000204440 410 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Gm44657-201ENSMUST00000208568 450 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Gm18000-201ENSMUST00000212153 800 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Gm2446-201ENSMUST00000220144 772 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Mir16-2-201ENSMUST00000083672 95 ntBASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
Upf3aQ3ULJ3 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
Upf3aQ3ULJ3 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Gm23951-201ENSMUST00000104029 132 ntBASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Gm26473-201ENSMUST00000116763 127 ntBASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Gm24475-201ENSMUST00000157435 143 ntBASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Gm25413-201ENSMUST00000158544 312 ntBASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Gm17065-201ENSMUST00000165245 239 ntBASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Gm27470-201ENSMUST00000184070 210 ntBASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Gm29600-201ENSMUST00000188687 377 ntBASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Gm6651-201ENSMUST00000189471 271 ntBASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Gm45049-201ENSMUST00000207586 591 ntBASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Gm45522-201ENSMUST00000210784 166 ntBASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 AC192616.3-201ENSMUST00000220797 1124 ntBASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Upf3aQ3ULJ3 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Upf3aQ3ULJ3 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Upf3aQ3ULJ3 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms