Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm13046-201ENSMUST00000117391 501 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm11490-201ENSMUST00000118128 272 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm12006-201ENSMUST00000120786 403 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm23206-201ENSMUST00000122720 184 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm13901-201ENSMUST00000137252 468 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm22597-201ENSMUST00000157602 80 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm24240-201ENSMUST00000157785 135 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Mir3964-201ENSMUST00000174898 74 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm43224-201ENSMUST00000201567 898 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm45049-201ENSMUST00000207586 591 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 AC129208.2-201ENSMUST00000228506 320 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm25586-201ENSMUST00000082499 112 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm23932-201ENSMUST00000082914 107 ntBASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm11784-201ENSMUST00000118568 474 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm11356-201ENSMUST00000118974 192 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm14428-201ENSMUST00000120408 822 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm13581-201ENSMUST00000120675 278 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm14694-201ENSMUST00000121856 282 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm26411-201ENSMUST00000157668 107 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm24438-201ENSMUST00000157893 115 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm20718-201ENSMUST00000176058 259 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm26189-201ENSMUST00000179879 107 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm25528-201ENSMUST00000180264 132 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm27599-201ENSMUST00000183758 174 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm19498-201ENSMUST00000191128 331 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm18956-201ENSMUST00000192857 480 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm37807-201ENSMUST00000194310 190 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm37523-201ENSMUST00000194901 412 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm42475-201ENSMUST00000201212 295 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm44295-201ENSMUST00000203805 437 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Snord7-201ENSMUST00000083781 97 ntBASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Trafd1Q3UDK1 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Gm11221-201ENSMUST00000117230 597 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Gm12787-201ENSMUST00000119234 396 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Gm11410-201ENSMUST00000120053 1143 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Gm13406-201ENSMUST00000121991 256 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Nron-204ENSMUST00000158971 370 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Gm22858-201ENSMUST00000174972 76 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Gm23053-201ENSMUST00000175136 96 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Gm27698-201ENSMUST00000184060 249 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Mir496b-201ENSMUST00000184935 113 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Gm19193-201ENSMUST00000190263 590 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Gm7675-201ENSMUST00000208828 686 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 AL669916.3-201ENSMUST00000213855 94 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 AL669916.6-201ENSMUST00000214610 94 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 AL669916.4-201ENSMUST00000215976 94 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 AC112972.1-201ENSMUST00000227329 365 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Gm22508-201ENSMUST00000082772 110 ntBASIC2.62□□□□□ -1.99
Trafd1Q3UDK1 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms