Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm22950-201ENSMUST00000082776 107 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm22251-201ENSMUST00000083216 107 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col9a1Q05722 AC153964.2-201ENSMUST00000217704 2474 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col9a1Q05722 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col9a1Q05722 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col9a1Q05722 AC154481.2-201ENSMUST00000222526 3175 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
Col9a1Q05722 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Col9a1Q05722 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.06□□□□□ -1.6
Col9a1Q05722 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.06□□□□□ -1.6
Col9a1Q05722 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col9a1Q05722 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col9a1Q05722 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col9a1Q05722 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col9a1Q05722 Gm11270-201ENSMUST00000117685 471 ntBASIC5.06□□□□□ -1.6
Col9a1Q05722 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.06□□□□□ -1.6
Col9a1Q05722 Gm22326-201ENSMUST00000158897 351 ntBASIC5.06□□□□□ -1.6
Col9a1Q05722 Gm15796-201ENSMUST00000162135 204 ntBASIC5.06□□□□□ -1.6
Col9a1Q05722 Gm17113-201ENSMUST00000170118 171 ntBASIC5.06□□□□□ -1.6
Col9a1Q05722 Gm25646-201ENSMUST00000178527 79 ntBASIC5.06□□□□□ -1.6
Col9a1Q05722 Gm27805-201ENSMUST00000184513 79 ntBASIC5.06□□□□□ -1.6
Col9a1Q05722 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC5.06□□□□□ -1.6
Col9a1Q05722 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.06□□□□□ -1.6
Col9a1Q05722 Gm25260-201ENSMUST00000083053 134 ntBASIC5.06□□□□□ -1.6
Col9a1Q05722 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col9a1Q05722 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Col9a1Q05722 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Col9a1Q05722 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col9a1Q05722 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col9a1Q05722 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col9a1Q05722 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col9a1Q05722 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col9a1Q05722 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col9a1Q05722 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col9a1Q05722 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col9a1Q05722 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col9a1Q05722 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Col9a1Q05722 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Col9a1Q05722 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.05□□□□□ -1.6
Col9a1Q05722 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col9a1Q05722 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.05□□□□□ -1.6
Col9a1Q05722 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Col9a1Q05722 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col9a1Q05722 Gm22266-201ENSMUST00000104011 138 ntBASIC5.05□□□□□ -1.6
Col9a1Q05722 Gm14215-201ENSMUST00000120578 221 ntBASIC5.05□□□□□ -1.6
Col9a1Q05722 Gm13443-201ENSMUST00000120770 555 ntBASIC5.05□□□□□ -1.6
Col9a1Q05722 Gm12422-201ENSMUST00000121431 302 ntBASIC5.05□□□□□ -1.6
Col9a1Q05722 Gm25045-201ENSMUST00000122670 99 ntBASIC5.05□□□□□ -1.6
Col9a1Q05722 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col9a1Q05722 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col9a1Q05722 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.05□□□□□ -1.6
Col9a1Q05722 AC134577.1-201ENSMUST00000227572 295 ntBASIC5.05□□□□□ -1.6
Col9a1Q05722 Gm24461-201ENSMUST00000082735 103 ntBASIC5.05□□□□□ -1.6
Col9a1Q05722 Gm23038-201ENSMUST00000083873 104 ntBASIC5.05□□□□□ -1.6
Col9a1Q05722 Gm24163-201ENSMUST00000093660 132 ntBASIC5.05□□□□□ -1.6
Col9a1Q05722 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Col9a1Q05722 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col9a1Q05722 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col9a1Q05722 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col9a1Q05722 AC117226.1-201ENSMUST00000221635 3737 ntBASIC5.05□□□□□ -1.6
Col9a1Q05722 Gm42486-201ENSMUST00000200369 3486 ntBASIC5.05□□□□□ -1.6
Col9a1Q05722 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.05□□□□□ -1.6
Col9a1Q05722 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col9a1Q05722 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col9a1Q05722 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Col9a1Q05722 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col9a1Q05722 Gm38269-201ENSMUST00000194549 3298 ntBASIC5.05□□□□□ -1.6
Col9a1Q05722 AC135119.1-201ENSMUST00000227935 3717 ntBASIC5.05□□□□□ -1.6
Col9a1Q05722 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Col9a1Q05722 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col9a1Q05722 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col9a1Q05722 Gm24831-201ENSMUST00000116778 126 ntBASIC5.04□□□□□ -1.6
Col9a1Q05722 n-R5s32-201ENSMUST00000122495 103 ntBASIC5.04□□□□□ -1.6
Col9a1Q05722 Gm22553-201ENSMUST00000157797 295 ntBASIC5.04□□□□□ -1.6
Col9a1Q05722 Gm24739-201ENSMUST00000158855 292 ntBASIC5.04□□□□□ -1.6
Col9a1Q05722 Gm17067-202ENSMUST00000180131 123 ntBASIC5.04□□□□□ -1.6
Col9a1Q05722 Gm27271-201ENSMUST00000183509 170 ntBASIC5.04□□□□□ -1.6
Col9a1Q05722 Mir6383-201ENSMUST00000184545 116 ntBASIC5.04□□□□□ -1.6
Col9a1Q05722 CT009696.2-201ENSMUST00000216668 432 ntBASIC5.04□□□□□ -1.6
Col9a1Q05722 AC187103.4-202ENSMUST00000225091 230 ntBASIC5.04□□□□□ -1.6
Col9a1Q05722 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.04□□□□□ -1.6
Col9a1Q05722 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Col9a1Q05722 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Col9a1Q05722 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Col9a1Q05722 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.04□□□□□ -1.6
Col9a1Q05722 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Col9a1Q05722 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col9a1Q05722 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col9a1Q05722 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Col9a1Q05722 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Col9a1Q05722 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
Col9a1Q05722 Gm22779-201ENSMUST00000104085 107 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 597.8 ms