Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Mir5129-201ENSMUST00000174938 78 ntBASIC1.73□□□□□ -2.13
H3f3aP84244 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
H3f3aP84244 Gm29641-201ENSMUST00000188955 259 ntBASIC1.73□□□□□ -2.13
H3f3aP84244 Gm43142-201ENSMUST00000198670 361 ntBASIC1.73□□□□□ -2.13
H3f3aP84244 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
H3f3aP84244 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.73□□□□□ -2.13
H3f3aP84244 Igkv11-114-201ENSMUST00000200013 346 ntBASIC1.73□□□□□ -2.13
H3f3aP84244 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
H3f3aP84244 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
H3f3aP84244 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
H3f3aP84244 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.73□□□□□ -2.13
H3f3aP84244 Mir322-201ENSMUST00000083484 95 ntBASIC1.73□□□□□ -2.13
H3f3aP84244 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
H3f3aP84244 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
H3f3aP84244 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC1.73□□□□□ -2.13
H3f3aP84244 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC1.72□□□□□ -2.13
H3f3aP84244 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
H3f3aP84244 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
H3f3aP84244 Gm8217-201ENSMUST00000119136 465 ntBASIC1.72□□□□□ -2.13
H3f3aP84244 Gm12706-201ENSMUST00000121588 698 ntBASIC1.72□□□□□ -2.13
H3f3aP84244 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.72□□□□□ -2.13
H3f3aP84244 Gm23548-201ENSMUST00000158963 106 ntBASIC1.72□□□□□ -2.13
H3f3aP84244 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC1.72□□□□□ -2.13
H3f3aP84244 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC1.72□□□□□ -2.13
H3f3aP84244 Mir6541-201ENSMUST00000183649 110 ntBASIC1.72□□□□□ -2.13
H3f3aP84244 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.72□□□□□ -2.13
H3f3aP84244 Gm3724-201ENSMUST00000197957 349 ntBASIC1.72□□□□□ -2.13
H3f3aP84244 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.72□□□□□ -2.13
H3f3aP84244 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
H3f3aP84244 Gm25126-201ENSMUST00000083343 102 ntBASIC1.72□□□□□ -2.13
H3f3aP84244 Gm23058-201ENSMUST00000093703 107 ntBASIC1.72□□□□□ -2.13
H3f3aP84244 Gm44708-201ENSMUST00000205580 2237 ntBASIC1.72□□□□□ -2.13
H3f3aP84244 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
H3f3aP84244 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
H3f3aP84244 Gm15760-201ENSMUST00000119553 283 ntBASIC1.71□□□□□ -2.14
H3f3aP84244 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.71□□□□□ -2.14
H3f3aP84244 Gm25961-201ENSMUST00000157174 135 ntBASIC1.71□□□□□ -2.14
H3f3aP84244 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.71□□□□□ -2.14
H3f3aP84244 Gm23933-201ENSMUST00000178405 79 ntBASIC1.71□□□□□ -2.14
H3f3aP84244 Gm27979-201ENSMUST00000185126 56 ntBASIC1.71□□□□□ -2.14
H3f3aP84244 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.71□□□□□ -2.14
H3f3aP84244 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC1.71□□□□□ -2.14
H3f3aP84244 Gm44058-201ENSMUST00000204335 467 ntBASIC1.71□□□□□ -2.14
H3f3aP84244 Gm44938-201ENSMUST00000208614 427 ntBASIC1.71□□□□□ -2.14
H3f3aP84244 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC1.71□□□□□ -2.14
H3f3aP84244 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC1.71□□□□□ -2.14
H3f3aP84244 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.71□□□□□ -2.14
H3f3aP84244 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.71□□□□□ -2.14
H3f3aP84244 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.71□□□□□ -2.14
H3f3aP84244 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
H3f3aP84244 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.71□□□□□ -2.14
H3f3aP84244 Mir93-201ENSMUST00000083593 88 ntBASIC1.71□□□□□ -2.14
H3f3aP84244 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
H3f3aP84244 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
H3f3aP84244 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
H3f3aP84244 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
H3f3aP84244 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
H3f3aP84244 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
H3f3aP84244 Gm14670-201ENSMUST00000117327 337 ntBASIC1.7□□□□□ -2.14
H3f3aP84244 Gm13406-201ENSMUST00000121991 256 ntBASIC1.7□□□□□ -2.14
H3f3aP84244 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.7□□□□□ -2.14
H3f3aP84244 Gm15692-201ENSMUST00000152173 352 ntBASIC1.7□□□□□ -2.14
H3f3aP84244 Gm9071-201ENSMUST00000165915 474 ntBASIC1.7□□□□□ -2.14
H3f3aP84244 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
H3f3aP84244 Mir7226-201ENSMUST00000184953 60 ntBASIC1.7□□□□□ -2.14
H3f3aP84244 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC1.7□□□□□ -2.14
H3f3aP84244 Gm44041-201ENSMUST00000203678 396 ntBASIC1.7□□□□□ -2.14
H3f3aP84244 Gm43865-201ENSMUST00000204721 127 ntBASIC1.7□□□□□ -2.14
H3f3aP84244 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC1.7□□□□□ -2.14
H3f3aP84244 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.7□□□□□ -2.14
H3f3aP84244 CT009764.1-201ENSMUST00000222260 483 ntBASIC1.7□□□□□ -2.14
H3f3aP84244 Gm18338-201ENSMUST00000222381 560 ntBASIC1.7□□□□□ -2.14
H3f3aP84244 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC1.7□□□□□ -2.14
H3f3aP84244 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
H3f3aP84244 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.7□□□□□ -2.14
H3f3aP84244 Gm24984-201ENSMUST00000104454 133 ntBASIC1.69□□□□□ -2.14
H3f3aP84244 Gm24907-201ENSMUST00000116932 128 ntBASIC1.69□□□□□ -2.14
H3f3aP84244 Gm12235-201ENSMUST00000118596 170 ntBASIC1.69□□□□□ -2.14
H3f3aP84244 Gm15381-201ENSMUST00000121501 1156 ntBASIC1.69□□□□□ -2.14
H3f3aP84244 Trav20-201ENSMUST00000142754 347 ntBASIC1.69□□□□□ -2.14
H3f3aP84244 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.69□□□□□ -2.14
H3f3aP84244 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC1.69□□□□□ -2.14
H3f3aP84244 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC1.69□□□□□ -2.14
H3f3aP84244 Mir6995-201ENSMUST00000183658 71 ntBASIC1.69□□□□□ -2.14
H3f3aP84244 Gm43582-201ENSMUST00000196149 343 ntBASIC1.69□□□□□ -2.14
H3f3aP84244 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC1.69□□□□□ -2.14
H3f3aP84244 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.69□□□□□ -2.14
H3f3aP84244 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.69□□□□□ -2.14
H3f3aP84244 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
H3f3aP84244 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
H3f3aP84244 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
H3f3aP84244 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
H3f3aP84244 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.68□□□□□ -2.14
H3f3aP84244 Gm43896-201ENSMUST00000203440 2032 ntBASIC1.68□□□□□ -2.14
H3f3aP84244 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
H3f3aP84244 Gm14292-201ENSMUST00000118761 456 ntBASIC1.68□□□□□ -2.14
H3f3aP84244 Gm11438-201ENSMUST00000121582 189 ntBASIC1.68□□□□□ -2.14
H3f3aP84244 Gm25666-201ENSMUST00000157702 107 ntBASIC1.68□□□□□ -2.14
H3f3aP84244 Gm22891-201ENSMUST00000158641 164 ntBASIC1.68□□□□□ -2.14
H3f3aP84244 Gm22666-201ENSMUST00000158717 164 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms