Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm12954-201ENSMUST00000118610 611 ntBASIC3.21□□□□□ -1.9
CiitaP79621 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.21□□□□□ -1.9
CiitaP79621 Gm11582-201ENSMUST00000121041 236 ntBASIC3.21□□□□□ -1.9
CiitaP79621 Gm11456-201ENSMUST00000121070 256 ntBASIC3.21□□□□□ -1.9
CiitaP79621 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC3.21□□□□□ -1.9
CiitaP79621 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CiitaP79621 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CiitaP79621 Gm23402-201ENSMUST00000178130 107 ntBASIC3.21□□□□□ -1.9
CiitaP79621 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.21□□□□□ -1.9
CiitaP79621 Gm28534-201ENSMUST00000187744 676 ntBASIC3.21□□□□□ -1.9
CiitaP79621 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CiitaP79621 Gm2676-201ENSMUST00000207279 606 ntBASIC3.21□□□□□ -1.9
CiitaP79621 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.21□□□□□ -1.9
CiitaP79621 AC120394.1-201ENSMUST00000217153 351 ntBASIC3.21□□□□□ -1.9
CiitaP79621 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.21□□□□□ -1.9
CiitaP79621 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
CiitaP79621 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.21□□□□□ -1.9
CiitaP79621 Gm22229-201ENSMUST00000082987 108 ntBASIC3.21□□□□□ -1.9
CiitaP79621 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.21□□□□□ -1.9
CiitaP79621 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.21□□□□□ -1.9
CiitaP79621 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CiitaP79621 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CiitaP79621 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CiitaP79621 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CiitaP79621 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CiitaP79621 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CiitaP79621 Mir878-201ENSMUST00000104680 78 ntBASIC3.2□□□□□ -1.9
CiitaP79621 Gm11819-201ENSMUST00000122192 372 ntBASIC3.2□□□□□ -1.9
CiitaP79621 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.2□□□□□ -1.9
CiitaP79621 Gm22851-201ENSMUST00000178741 94 ntBASIC3.2□□□□□ -1.9
CiitaP79621 Gm25074-201ENSMUST00000178782 94 ntBASIC3.2□□□□□ -1.9
CiitaP79621 Gm24264-201ENSMUST00000179835 94 ntBASIC3.2□□□□□ -1.9
CiitaP79621 Gm28597-201ENSMUST00000187664 666 ntBASIC3.2□□□□□ -1.9
CiitaP79621 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CiitaP79621 Gm8041-201ENSMUST00000199755 616 ntBASIC3.2□□□□□ -1.9
CiitaP79621 Gm45105-201ENSMUST00000207824 397 ntBASIC3.2□□□□□ -1.9
CiitaP79621 Gm45772-201ENSMUST00000212961 240 ntBASIC3.2□□□□□ -1.9
CiitaP79621 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.2□□□□□ -1.9
CiitaP79621 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.2□□□□□ -1.9
CiitaP79621 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.2□□□□□ -1.9
CiitaP79621 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CiitaP79621 Snord38a-201ENSMUST00000083746 71 ntBASIC3.2□□□□□ -1.9
CiitaP79621 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.2□□□□□ -1.9
CiitaP79621 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CiitaP79621 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CiitaP79621 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CiitaP79621 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CiitaP79621 Gm25376-201ENSMUST00000104340 133 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Gm2066-201ENSMUST00000118046 389 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Gm14293-201ENSMUST00000118528 577 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Gm14159-201ENSMUST00000119832 451 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Gm14362-201ENSMUST00000121679 273 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Gm14366-201ENSMUST00000121970 730 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Gm15254-201ENSMUST00000149567 273 ntBASIC3.19□□□□□ -1.9
CiitaP79621 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CiitaP79621 Gm25624-201ENSMUST00000157222 275 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Gm24393-201ENSMUST00000158135 97 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Gm22839-201ENSMUST00000158436 304 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Gm24551-201ENSMUST00000158645 92 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Gm23704-201ENSMUST00000158844 340 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CiitaP79621 Gm24315-201ENSMUST00000177835 127 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CiitaP79621 Gm11395-201ENSMUST00000181011 499 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Trbv22-201ENSMUST00000191697 291 ntBASIC3.19□□□□□ -1.9
CiitaP79621 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Gm17906-201ENSMUST00000202480 901 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Gm44223-201ENSMUST00000204854 114 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.19□□□□□ -1.9
CiitaP79621 AC153526.1-201ENSMUST00000219750 190 ntBASIC3.19□□□□□ -1.9
CiitaP79621 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.19□□□□□ -1.9
CiitaP79621 AC124569.4-201ENSMUST00000223830 1220 ntBASIC3.19□□□□□ -1.9
CiitaP79621 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CiitaP79621 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CiitaP79621 Mir137-201ENSMUST00000083635 73 ntBASIC3.19□□□□□ -1.9
CiitaP79621 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CiitaP79621 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CiitaP79621 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CiitaP79621 Mir499-201ENSMUST00000102357 79 ntBASIC3.18□□□□□ -1.9
CiitaP79621 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CiitaP79621 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.18□□□□□ -1.9
CiitaP79621 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC3.18□□□□□ -1.9
CiitaP79621 Gm22141-201ENSMUST00000157403 277 ntBASIC3.18□□□□□ -1.9
CiitaP79621 Gm25220-201ENSMUST00000157546 95 ntBASIC3.18□□□□□ -1.9
CiitaP79621 Gm24240-201ENSMUST00000157785 135 ntBASIC3.18□□□□□ -1.9
CiitaP79621 Gm22098-201ENSMUST00000157930 85 ntBASIC3.18□□□□□ -1.9
CiitaP79621 Gm22538-201ENSMUST00000158169 299 ntBASIC3.18□□□□□ -1.9
CiitaP79621 Gm25360-201ENSMUST00000178786 191 ntBASIC3.18□□□□□ -1.9
CiitaP79621 Gm21673-201ENSMUST00000186640 436 ntBASIC3.18□□□□□ -1.9
CiitaP79621 Gm18185-201ENSMUST00000186725 667 ntBASIC3.18□□□□□ -1.9
CiitaP79621 Gm28628-201ENSMUST00000187006 264 ntBASIC3.18□□□□□ -1.9
CiitaP79621 Gm28629-201ENSMUST00000187309 263 ntBASIC3.18□□□□□ -1.9
CiitaP79621 Gm21135-201ENSMUST00000189023 436 ntBASIC3.18□□□□□ -1.9
CiitaP79621 Gm42164-201ENSMUST00000198881 379 ntBASIC3.18□□□□□ -1.9
CiitaP79621 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CiitaP79621 Gm43955-201ENSMUST00000204332 142 ntBASIC3.18□□□□□ -1.9
CiitaP79621 Gm44157-201ENSMUST00000204720 410 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms