Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm23352-201ENSMUST00000158428 64 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.3□□□□□ -2.04
Ufd1P70362 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Ufd1P70362 Gm27786-201ENSMUST00000184337 70 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Gm37495-201ENSMUST00000194590 264 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.3□□□□□ -2.04
Ufd1P70362 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Ufd1P70362 Gm42475-201ENSMUST00000201212 295 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 AC158521.1-201ENSMUST00000225295 660 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Gm23736-201ENSMUST00000082553 75 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Gm10343-201ENSMUST00000096279 348 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.3□□□□□ -2.04
Ufd1P70362 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Ufd1P70362 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
Ufd1P70362 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
Ufd1P70362 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Ufd1P70362 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Ufd1P70362 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Ufd1P70362 Gm26147-201ENSMUST00000104479 114 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Ufd1P70362 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Ufd1P70362 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC2.29□□□□□ -2.04
Ufd1P70362 Gm15272-201ENSMUST00000120865 233 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 Gm14629-201ENSMUST00000122428 144 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.29□□□□□ -2.04
Ufd1P70362 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.29□□□□□ -2.04
Ufd1P70362 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.29□□□□□ -2.04
Ufd1P70362 Gm24439-201ENSMUST00000157894 117 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 Gm25835-201ENSMUST00000158917 144 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Ufd1P70362 Mir6963-201ENSMUST00000183535 71 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 Mir7074-201ENSMUST00000183884 63 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.29□□□□□ -2.04
Ufd1P70362 Gm28647-201ENSMUST00000188416 197 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Ufd1P70362 Gm43402-201ENSMUST00000197159 159 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 Gm43804-201ENSMUST00000198280 456 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 Gm43284-201ENSMUST00000200103 253 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 Gm29848-201ENSMUST00000203107 295 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 Gm43901-201ENSMUST00000203247 453 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC2.29□□□□□ -2.04
Ufd1P70362 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 Gm3442-201ENSMUST00000216808 710 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 Gm2628-201ENSMUST00000218019 426 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 Gm46369-201ENSMUST00000221577 401 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 CT009604.2-201ENSMUST00000225531 377 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 AC102291.2-201ENSMUST00000228083 367 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.29□□□□□ -2.04
Ufd1P70362 Gm22247-201ENSMUST00000082476 131 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Ufd1P70362 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
Ufd1P70362 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.29□□□□□ -2.04
Ufd1P70362 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Ufd1P70362 AC154481.2-201ENSMUST00000222526 3175 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Ufd1P70362 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Ufd1P70362 Gm24126-201ENSMUST00000104111 106 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 Mir1192-201ENSMUST00000116976 121 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 Gm11845-201ENSMUST00000117886 327 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 Gm15167-201ENSMUST00000121997 187 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 Gm23980-201ENSMUST00000157135 158 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 Gm23137-201ENSMUST00000157559 107 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 Gm19898-201ENSMUST00000177490 251 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 Gm11395-201ENSMUST00000181011 499 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 Gm5224-201ENSMUST00000183060 350 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.28□□□□□ -2.04
Ufd1P70362 Gm37037-201ENSMUST00000194475 424 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.28□□□□□ -2.04
Ufd1P70362 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.28□□□□□ -2.04
Ufd1P70362 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 AC156795.1-201ENSMUST00000214655 414 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 AC173482.2-201ENSMUST00000224044 750 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.28□□□□□ -2.04
Ufd1P70362 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Ufd1P70362 n-R5s37-201ENSMUST00000082533 118 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 Gm26129-201ENSMUST00000082719 107 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Ufd1P70362 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.28□□□□□ -2.04
Ufd1P70362 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Ufd1P70362 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.28□□□□□ -2.05
Ufd1P70362 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Ufd1P70362 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.27□□□□□ -2.05
Ufd1P70362 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Ufd1P70362 Gm26384-201ENSMUST00000102183 110 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms