Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC2.06□□□□□ -2.08
Cux1P53564 AC132104.1-201ENSMUST00000213615 260 ntBASIC2.06□□□□□ -2.08
Cux1P53564 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC2.06□□□□□ -2.08
Cux1P53564 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC2.05□□□□□ -2.08
Cux1P53564 Gm22208-201ENSMUST00000122658 110 ntBASIC2.05□□□□□ -2.08
Cux1P53564 Gm23469-201ENSMUST00000157131 104 ntBASIC2.05□□□□□ -2.08
Cux1P53564 Gm8676-201ENSMUST00000184206 637 ntBASIC2.05□□□□□ -2.08
Cux1P53564 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.05□□□□□ -2.08
Cux1P53564 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.05□□□□□ -2.08
Cux1P53564 Gm25409-201ENSMUST00000083764 131 ntBASIC2.05□□□□□ -2.08
Cux1P53564 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.05□□□□□ -2.08
Cux1P53564 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.05□□□□□ -2.08
Cux1P53564 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.05□□□□□ -2.08
Cux1P53564 Gm11284-201ENSMUST00000121910 1887 ntBASIC2.04□□□□□ -2.08
Cux1P53564 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Cux1P53564 Gm26029-201ENSMUST00000158659 132 ntBASIC2.04□□□□□ -2.08
Cux1P53564 Gm23340-201ENSMUST00000158955 123 ntBASIC2.04□□□□□ -2.08
Cux1P53564 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Cux1P53564 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Cux1P53564 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC2.04□□□□□ -2.08
Cux1P53564 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2.04□□□□□ -2.08
Cux1P53564 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC2.04□□□□□ -2.08
Cux1P53564 Gm20948-201ENSMUST00000211091 449 ntBASIC2.04□□□□□ -2.08
Cux1P53564 AC157772.2-201ENSMUST00000228202 259 ntBASIC2.04□□□□□ -2.08
Cux1P53564 Gm23140-201ENSMUST00000082487 107 ntBASIC2.04□□□□□ -2.08
Cux1P53564 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.03□□□□□ -2.08
Cux1P53564 Gm9440-201ENSMUST00000119667 539 ntBASIC2.03□□□□□ -2.08
Cux1P53564 Gm14903-201ENSMUST00000122435 537 ntBASIC2.03□□□□□ -2.08
Cux1P53564 Gm17113-201ENSMUST00000170118 171 ntBASIC2.03□□□□□ -2.08
Cux1P53564 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.03□□□□□ -2.08
Cux1P53564 Gm44634-201ENSMUST00000206119 152 ntBASIC2.03□□□□□ -2.08
Cux1P53564 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.03□□□□□ -2.08
Cux1P53564 AC115878.1-201ENSMUST00000227247 334 ntBASIC2.03□□□□□ -2.08
Cux1P53564 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Cux1P53564 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.03□□□□□ -2.08
Cux1P53564 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.03□□□□□ -2.08
Cux1P53564 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Cux1P53564 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Cux1P53564 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Cux1P53564 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Cux1P53564 Gm29429-201ENSMUST00000187071 121 ntBASIC2.02□□□□□ -2.09
Cux1P53564 Gm44476-201ENSMUST00000196225 91 ntBASIC2.02□□□□□ -2.09
Cux1P53564 Gm22829-201ENSMUST00000083771 106 ntBASIC2.02□□□□□ -2.09
Cux1P53564 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Cux1P53564 Gm14215-201ENSMUST00000120578 221 ntBASIC2.01□□□□□ -2.09
Cux1P53564 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC2.01□□□□□ -2.09
Cux1P53564 Gm23190-201ENSMUST00000180307 64 ntBASIC2.01□□□□□ -2.09
Cux1P53564 Gm28191-201ENSMUST00000189112 211 ntBASIC2.01□□□□□ -2.09
Cux1P53564 Gm10925-201ENSMUST00000189941 678 ntBASIC2.01□□□□□ -2.09
Cux1P53564 Gm37993-201ENSMUST00000195301 988 ntBASIC2.01□□□□□ -2.09
Cux1P53564 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC2.01□□□□□ -2.09
Cux1P53564 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.01□□□□□ -2.09
Cux1P53564 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Cux1P53564 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Cux1P53564 Mir6541-201ENSMUST00000183649 110 ntBASIC2.01□□□□□ -2.09
Cux1P53564 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Cux1P53564 Gm28552-201ENSMUST00000190725 388 ntBASIC2.01□□□□□ -2.09
Cux1P53564 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC2.01□□□□□ -2.09
Cux1P53564 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC2.01□□□□□ -2.09
Cux1P53564 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC2.01□□□□□ -2.09
Cux1P53564 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.01□□□□□ -2.09
Cux1P53564 Gm14591-201ENSMUST00000120407 518 ntBASIC2□□□□□ -2.09
Cux1P53564 Gm6651-201ENSMUST00000189471 271 ntBASIC2□□□□□ -2.09
Cux1P53564 Gm31532-201ENSMUST00000203555 767 ntBASIC2□□□□□ -2.09
Cux1P53564 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC2□□□□□ -2.09
Cux1P53564 AC125531.1-201ENSMUST00000219849 221 ntBASIC2□□□□□ -2.09
Cux1P53564 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2□□□□□ -2.09
Cux1P53564 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Cux1P53564 Gm25107-201ENSMUST00000122472 129 ntBASIC1.99□□□□□ -2.09
Cux1P53564 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC1.99□□□□□ -2.09
Cux1P53564 Gm27245-201ENSMUST00000184385 376 ntBASIC1.99□□□□□ -2.09
Cux1P53564 Gm44274-201ENSMUST00000203417 256 ntBASIC1.99□□□□□ -2.09
Cux1P53564 Gm18645-202ENSMUST00000212222 760 ntBASIC1.99□□□□□ -2.09
Cux1P53564 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Cux1P53564 Gm19540-201ENSMUST00000221843 810 ntBASIC1.99□□□□□ -2.09
Cux1P53564 Gm17976-201ENSMUST00000184037 1909 ntBASIC1.99□□□□□ -2.09
Cux1P53564 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.98□□□□□ -2.09
Cux1P53564 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Cux1P53564 Gm14940-201ENSMUST00000119309 495 ntBASIC1.98□□□□□ -2.09
Cux1P53564 Gm14069-201ENSMUST00000120815 229 ntBASIC1.98□□□□□ -2.09
Cux1P53564 Gm14623-201ENSMUST00000121398 603 ntBASIC1.98□□□□□ -2.09
Cux1P53564 Gm16458-201ENSMUST00000121428 502 ntBASIC1.98□□□□□ -2.09
Cux1P53564 Gm8988-201ENSMUST00000155015 1240 ntBASIC1.98□□□□□ -2.09
Cux1P53564 Gm44520-201ENSMUST00000205447 802 ntBASIC1.98□□□□□ -2.09
Cux1P53564 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC1.98□□□□□ -2.09
Cux1P53564 AC134254.5-201ENSMUST00000223436 400 ntBASIC1.98□□□□□ -2.09
Cux1P53564 CT030254.3-201ENSMUST00000225959 1231 ntBASIC1.98□□□□□ -2.09
Cux1P53564 AC163664.1-201ENSMUST00000226251 1248 ntBASIC1.98□□□□□ -2.09
Cux1P53564 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC1.98□□□□□ -2.09
Cux1P53564 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Cux1P53564 AC115047.2-201ENSMUST00000214421 1848 ntBASIC1.97□□□□□ -2.09
Cux1P53564 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Cux1P53564 Gm17064-201ENSMUST00000167690 452 ntBASIC1.97□□□□□ -2.09
Cux1P53564 Gm3104-201ENSMUST00000171004 473 ntBASIC1.97□□□□□ -2.09
Cux1P53564 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC1.97□□□□□ -2.09
Cux1P53564 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC1.97□□□□□ -2.09
Cux1P53564 Gm28647-201ENSMUST00000188416 197 ntBASIC1.97□□□□□ -2.09
Cux1P53564 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.97□□□□□ -2.09
Cux1P53564 Gm43675-201ENSMUST00000199468 1184 ntBASIC1.97□□□□□ -2.09
Cux1P53564 Gm46194-201ENSMUST00000218136 320 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms