Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Shmt1P50431 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Shmt1P50431 Gm26449-201ENSMUST00000082452 104 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Gm23925-201ENSMUST00000082471 132 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Snord21-201ENSMUST00000082519 94 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Gm23721-201ENSMUST00000083005 107 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Gm26055-201ENSMUST00000083038 107 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
Shmt1P50431 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Shmt1P50431 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Shmt1P50431 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 BC051076-202ENSMUST00000199477 2868 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.91□□□□□ -1.78
Shmt1P50431 Gm24338-201ENSMUST00000104205 127 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Shmt1P50431 Gm13880-201ENSMUST00000118421 474 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm16005-201ENSMUST00000120515 269 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm25105-201ENSMUST00000122477 130 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm23585-201ENSMUST00000157656 102 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm23865-201ENSMUST00000157723 97 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm24314-201ENSMUST00000158274 123 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm26028-201ENSMUST00000158660 294 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm25643-201ENSMUST00000158874 103 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm24168-201ENSMUST00000178825 107 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC3.91□□□□□ -1.78
Shmt1P50431 Gm27410-201ENSMUST00000183851 115 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm29397-201ENSMUST00000185205 333 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Shmt1P50431 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Shmt1P50431 Gm29192-201ENSMUST00000190942 377 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.91□□□□□ -1.78
Shmt1P50431 Gm45150-201ENSMUST00000206051 467 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm45317-201ENSMUST00000210385 223 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm20734-201ENSMUST00000216939 193 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm5265-201ENSMUST00000076828 342 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm26446-201ENSMUST00000082455 103 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm25205-201ENSMUST00000082841 103 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm43009-201ENSMUST00000199979 3566 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Shmt1P50431 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Shmt1P50431 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Shmt1P50431 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.91□□□□□ -1.78
Shmt1P50431 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.9□□□□□ -1.78
Shmt1P50431 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
Shmt1P50431 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Shmt1P50431 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Shmt1P50431 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Shmt1P50431 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Shmt1P50431 Gm23422-201ENSMUST00000102000 107 ntBASIC3.9□□□□□ -1.79
Shmt1P50431 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.9□□□□□ -1.79
Shmt1P50431 Gm23697-201ENSMUST00000103897 110 ntBASIC3.9□□□□□ -1.79
Shmt1P50431 Gm12779-201ENSMUST00000121496 143 ntBASIC3.9□□□□□ -1.79
Shmt1P50431 Gm14694-201ENSMUST00000121856 282 ntBASIC3.9□□□□□ -1.79
Shmt1P50431 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.9□□□□□ -1.79
Shmt1P50431 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.9□□□□□ -1.79
Shmt1P50431 Gm23540-201ENSMUST00000157543 164 ntBASIC3.9□□□□□ -1.79
Shmt1P50431 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.9□□□□□ -1.79
Shmt1P50431 Gm29352-201ENSMUST00000188054 544 ntBASIC3.9□□□□□ -1.79
Shmt1P50431 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.9□□□□□ -1.79
Shmt1P50431 Gm37338-201ENSMUST00000191986 127 ntBASIC3.9□□□□□ -1.79
Shmt1P50431 Gm45245-201ENSMUST00000210082 376 ntBASIC3.9□□□□□ -1.79
Shmt1P50431 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.9□□□□□ -1.79
Shmt1P50431 AC134254.5-201ENSMUST00000223436 400 ntBASIC3.9□□□□□ -1.79
Shmt1P50431 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.9□□□□□ -1.79
Shmt1P50431 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC3.9□□□□□ -1.79
Shmt1P50431 Gm24147-201ENSMUST00000082763 144 ntBASIC3.9□□□□□ -1.79
Shmt1P50431 Mir452-201ENSMUST00000093629 85 ntBASIC3.9□□□□□ -1.79
Shmt1P50431 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Shmt1P50431 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Shmt1P50431 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Shmt1P50431 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Shmt1P50431 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Shmt1P50431 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Shmt1P50431 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.89□□□□□ -1.79
Shmt1P50431 Gm15148-201ENSMUST00000117602 156 ntBASIC3.89□□□□□ -1.79
Shmt1P50431 Gm13153-201ENSMUST00000120969 637 ntBASIC3.89□□□□□ -1.79
Shmt1P50431 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.89□□□□□ -1.79
Shmt1P50431 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.89□□□□□ -1.79
Shmt1P50431 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.89□□□□□ -1.79
Shmt1P50431 Gm23231-201ENSMUST00000157299 104 ntBASIC3.89□□□□□ -1.79
Shmt1P50431 Gm16303-201ENSMUST00000161498 390 ntBASIC3.89□□□□□ -1.79
Shmt1P50431 Gm25360-201ENSMUST00000178786 191 ntBASIC3.89□□□□□ -1.79
Shmt1P50431 Gm6651-201ENSMUST00000189471 271 ntBASIC3.89□□□□□ -1.79
Shmt1P50431 Gm43286-201ENSMUST00000197420 424 ntBASIC3.89□□□□□ -1.79
Shmt1P50431 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.89□□□□□ -1.79
Shmt1P50431 Gm44391-201ENSMUST00000198490 93 ntBASIC3.89□□□□□ -1.79
Shmt1P50431 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC3.89□□□□□ -1.79
Shmt1P50431 Gm7407-201ENSMUST00000208301 568 ntBASIC3.89□□□□□ -1.79
Shmt1P50431 Gm45313-201ENSMUST00000210584 178 ntBASIC3.89□□□□□ -1.79
Shmt1P50431 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 105.1 ms