Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm7327-201ENSMUST00000120925 652 ntBASIC3.26□□□□□ -1.89
Traf1P39428 Gm26277-201ENSMUST00000157097 152 ntBASIC3.26□□□□□ -1.89
Traf1P39428 Gm25280-201ENSMUST00000157269 101 ntBASIC3.26□□□□□ -1.89
Traf1P39428 Gm24240-201ENSMUST00000157785 135 ntBASIC3.26□□□□□ -1.89
Traf1P39428 Gm16111-201ENSMUST00000162128 285 ntBASIC3.26□□□□□ -1.89
Traf1P39428 Gm8207-201ENSMUST00000171204 502 ntBASIC3.26□□□□□ -1.89
Traf1P39428 Gm22716-201ENSMUST00000177596 107 ntBASIC3.26□□□□□ -1.89
Traf1P39428 Mir6402-201ENSMUST00000183406 80 ntBASIC3.26□□□□□ -1.89
Traf1P39428 Mir7242-201ENSMUST00000183710 79 ntBASIC3.26□□□□□ -1.89
Traf1P39428 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Traf1P39428 Gm45101-201ENSMUST00000208327 232 ntBASIC3.26□□□□□ -1.89
Traf1P39428 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC3.26□□□□□ -1.89
Traf1P39428 AC167192.4-201ENSMUST00000224087 993 ntBASIC3.26□□□□□ -1.89
Traf1P39428 AC102352.1-201ENSMUST00000224187 582 ntBASIC3.26□□□□□ -1.89
Traf1P39428 AC122341.1-201ENSMUST00000227291 560 ntBASIC3.26□□□□□ -1.89
Traf1P39428 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.26□□□□□ -1.89
Traf1P39428 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Traf1P39428 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Traf1P39428 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.26□□□□□ -1.89
Traf1P39428 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Traf1P39428 Mir542-201ENSMUST00000102186 85 ntBASIC3.25□□□□□ -1.89
Traf1P39428 Gm13510-201ENSMUST00000118659 429 ntBASIC3.25□□□□□ -1.89
Traf1P39428 Gm15272-201ENSMUST00000120865 233 ntBASIC3.25□□□□□ -1.89
Traf1P39428 DQ267100-201ENSMUST00000122600 72 ntBASIC3.25□□□□□ -1.89
Traf1P39428 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC3.25□□□□□ -1.89
Traf1P39428 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Traf1P39428 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.25□□□□□ -1.89
Traf1P39428 Gm7582-201ENSMUST00000160831 603 ntBASIC3.25□□□□□ -1.89
Traf1P39428 Gm5277-201ENSMUST00000164923 556 ntBASIC3.25□□□□□ -1.89
Traf1P39428 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC3.25□□□□□ -1.89
Traf1P39428 Snord116l12-201ENSMUST00000179816 94 ntBASIC3.25□□□□□ -1.89
Traf1P39428 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.25□□□□□ -1.89
Traf1P39428 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC3.25□□□□□ -1.89
Traf1P39428 Gm19089-201ENSMUST00000197207 613 ntBASIC3.25□□□□□ -1.89
Traf1P39428 Gm45232-201ENSMUST00000207811 162 ntBASIC3.25□□□□□ -1.89
Traf1P39428 Gm18703-201ENSMUST00000215318 333 ntBASIC3.25□□□□□ -1.89
Traf1P39428 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC3.25□□□□□ -1.89
Traf1P39428 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Traf1P39428 AC170810.3-201ENSMUST00000226177 374 ntBASIC3.25□□□□□ -1.89
Traf1P39428 AC166344.2-201ENSMUST00000226747 374 ntBASIC3.25□□□□□ -1.89
Traf1P39428 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.25□□□□□ -1.89
Traf1P39428 CT025525.2-201ENSMUST00000227743 423 ntBASIC3.25□□□□□ -1.89
Traf1P39428 Gm23723-201ENSMUST00000082996 132 ntBASIC3.25□□□□□ -1.89
Traf1P39428 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Traf1P39428 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Traf1P39428 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.24□□□□□ -1.89
Traf1P39428 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Traf1P39428 Gm25500-201ENSMUST00000104426 123 ntBASIC3.24□□□□□ -1.89
Traf1P39428 Gm14821-201ENSMUST00000121975 435 ntBASIC3.24□□□□□ -1.89
Traf1P39428 Gm25784-201ENSMUST00000122524 81 ntBASIC3.24□□□□□ -1.89
Traf1P39428 Gm24784-201ENSMUST00000157640 62 ntBASIC3.24□□□□□ -1.89
Traf1P39428 Gm23078-201ENSMUST00000157848 148 ntBASIC3.24□□□□□ -1.89
Traf1P39428 Gm22416-201ENSMUST00000158590 88 ntBASIC3.24□□□□□ -1.89
Traf1P39428 Gm25119-201ENSMUST00000158815 88 ntBASIC3.24□□□□□ -1.89
Traf1P39428 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Traf1P39428 Gm5116-201ENSMUST00000187732 463 ntBASIC3.24□□□□□ -1.89
Traf1P39428 Gm29627-201ENSMUST00000187984 463 ntBASIC3.24□□□□□ -1.89
Traf1P39428 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.24□□□□□ -1.89
Traf1P39428 Gm8041-201ENSMUST00000199755 616 ntBASIC3.24□□□□□ -1.89
Traf1P39428 Gm44961-201ENSMUST00000207450 196 ntBASIC3.24□□□□□ -1.89
Traf1P39428 Gm44688-201ENSMUST00000209083 537 ntBASIC3.24□□□□□ -1.89
Traf1P39428 Gm45395-201ENSMUST00000209891 559 ntBASIC3.24□□□□□ -1.89
Traf1P39428 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC3.24□□□□□ -1.89
Traf1P39428 Gm22974-201ENSMUST00000083301 103 ntBASIC3.24□□□□□ -1.89
Traf1P39428 AC115891.1-201ENSMUST00000215798 1755 ntBASIC3.24□□□□□ -1.89
Traf1P39428 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Traf1P39428 Gm25414-201ENSMUST00000101814 107 ntBASIC3.23□□□□□ -1.89
Traf1P39428 Gm23128-201ENSMUST00000104257 132 ntBASIC3.23□□□□□ -1.89
Traf1P39428 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC3.23□□□□□ -1.89
Traf1P39428 Gm14899-201ENSMUST00000118673 548 ntBASIC3.23□□□□□ -1.89
Traf1P39428 Gm14736-201ENSMUST00000121470 336 ntBASIC3.23□□□□□ -1.89
Traf1P39428 Gm25270-201ENSMUST00000122606 138 ntBASIC3.23□□□□□ -1.89
Traf1P39428 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Traf1P39428 Gm25470-201ENSMUST00000175576 111 ntBASIC3.23□□□□□ -1.89
Traf1P39428 Gm8392-201ENSMUST00000185647 835 ntBASIC3.23□□□□□ -1.89
Traf1P39428 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC3.23□□□□□ -1.89
Traf1P39428 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC3.23□□□□□ -1.89
Traf1P39428 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Traf1P39428 Gm28779-201ENSMUST00000189678 323 ntBASIC3.23□□□□□ -1.89
Traf1P39428 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.23□□□□□ -1.89
Traf1P39428 Gm38146-201ENSMUST00000194121 1293 ntBASIC3.23□□□□□ -1.89
Traf1P39428 Gm37007-201ENSMUST00000194234 319 ntBASIC3.23□□□□□ -1.89
Traf1P39428 Gm23128-202ENSMUST00000196578 133 ntBASIC3.23□□□□□ -1.89
Traf1P39428 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.23□□□□□ -1.89
Traf1P39428 Gm42857-201ENSMUST00000200823 339 ntBASIC3.23□□□□□ -1.89
Traf1P39428 Gm43955-201ENSMUST00000204332 142 ntBASIC3.23□□□□□ -1.89
Traf1P39428 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.23□□□□□ -1.89
Traf1P39428 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.23□□□□□ -1.89
Traf1P39428 AC113031.5-201ENSMUST00000227116 606 ntBASIC3.23□□□□□ -1.89
Traf1P39428 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Traf1P39428 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Traf1P39428 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Traf1P39428 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Traf1P39428 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Traf1P39428 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
Traf1P39428 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Traf1P39428 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Traf1P39428 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Traf1P39428 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Traf1P39428 Mir499-201ENSMUST00000102357 79 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms